Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0314 |
Symbol | |
ID | 6066864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 365590 |
End bp | 366258 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641599713 |
Product | HAD family hydrolase |
Protein accession | YP_001723319 |
Protein GI | 170018365 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.104507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATCA ACATTGCCTG GCAGGACGTA GATACCGTTC TGCTGGATAT GGACGGCACG TTGCTCGACC TCGCCTTCGA TAACTATTTC TGGCAAAAGC TGGTGCCTGA AACATGGGGC GCGAAAAACG GGGTTACGCC ACAGGAAGCG ATGGAATATA TGCGCCAGCA ATATCACGAC GTACAGCATA CGCTAAACTG GTACTGTCTT GATTACTGGA GTGAGCAACT GGGTCTGGAT ATCTGTGCGA TGACCACCGA GATGGGACCG CGTGCCGTAC TGCGTGAAGA TACCATTCCG TTTCTTGAGG CACTGAAAGC CAGCGGTAAG CAGCGAATTT TGCTCACCAA TGCGCATCCG CACAACCTGT CGGTAAAACT TGAGCATACG GGTCTGGACG CACACCTTGA TTTATTACTT TCCACCCACA CATTTGGTTA TCCGAAAGAG GATCAGCGGT TATGGCATGC AGTGGCCGAA GCTACGGGTC TGAAAGCTGA AAGAACGCTG TTTATTGATG ACAGCGAAGC GATTCTCGAT GCTGCCGCGC AATTTGGTAT TCGTTACTGC CTCGGCGTGA CTAATCCTGA TTCCGGGATT GCCGAGAAAC AGTATCAACG CCATCCGTCA CTGAATGACT ACCGCCGCCT GATCCCCTCG CTAATGTGA
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Protein sequence | MHINIAWQDV DTVLLDMDGT LLDLAFDNYF WQKLVPETWG AKNGVTPQEA MEYMRQQYHD VQHTLNWYCL DYWSEQLGLD ICAMTTEMGP RAVLREDTIP FLEALKASGK QRILLTNAHP HNLSVKLEHT GLDAHLDLLL STHTFGYPKE DQRLWHAVAE ATGLKAERTL FIDDSEAILD AAAQFGIRYC LGVTNPDSGI AEKQYQRHPS LNDYRRLIPS LM
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