Gene EcolC_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0310 
Symbol 
ID6065068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp360487 
End bp362109 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content54% 
IMG OID641599709 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_001723315 
Protein GI170018361 
COG category[C] Energy production and conversion 
COG ID[COG1866] Phosphoenolpyruvate carboxykinase (ATP) 
TIGRFAM ID[TIGR00224] phosphoenolpyruvate carboxykinase (ATP) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.06284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTA ACAATGGTTT GACCCCGCAA GAACTCGAGG CTTATGGTAT CAGTGACGTA 
CATGATATCG TTTACAACCC AAGCTACGAC CTGCTGTATC AGGAAGAGCT CGATCCGAGC
CTGACAGGTT ATGAGCGCGG GGTGTTAACT AATCTGGGTG CCGTTGCCGT CGATACCGGG
ATCTTCACCG GTCGTTCACC AAAAGATAAG TATATCGTCC GTGACGATAC CACTCGCGAT
ACTTTCTGGT GGGCAGACAA AGGCAAAGGT AAGAACGACA ACAAACCTCT CTCTCCGGAA
ACCTGGCAGC ATCTGAAAGG CCTGGTGACC AGGCAGCTTT CCGGCAAACG TCTGTTCGTT
GTCGACGCTT TCTGTGGTGC GAACCCGGAT ACTCGTCTTT CCGTCCGTTT CATCACCGAA
GTGGCCTGGC AGGCGCATTT TGTCAAAAAC ATGTTTATTC GCCCGAGCGA TGAAGAACTG
GCAGGTTTCA AACCAGACTT TATCGTTATG AACGGCGCGA AGTGCACTAA CCCGCAGTGG
AAAGAACAGG GTCTCAACTC CGAAAACTTC GTGGCGTTTA ACCTGACCGA GCGCATGCAG
CTGATTGGCG GCACCTGGTA CGGCGGCGAA ATGAAGAAAG GGATGTTCTC GATGATGAAC
TACCTGCTGC CGCTGAAAGG TATCGCTTCT ATGCACTGCT CCGCCAACGT TGGTGAGAAA
GGCGATGTTG CGGTGTTCTT CGGCCTTTCC GGCACCGGTA AAACCACCCT TTCCACCGAC
CCGAAACGTC GCCTGATTGG CGATGACGAA CACGGCTGGG ACGATGACGG CGTGTTTAAC
TTCGAAGGCG GCTGCTACGC AAAAACTATC AAGCTGTCGA AAGAAGCGGA ACCTGAAATC
TACAACGCTA TCCGTCGTGA TGCGTTGCTG GAAAACGTCA CCGTGCGTGA AGATGGCACT
ATCGACTTTG ATGATGGTTC AAAAACCGAG AACACCCGCG TTTCTTATCC GATCTATCAC
ATCGATAACA TTGTTAAGCC GGTTTCCAAA GCGGGCCACG CGACTAAGGT TATCTTCCTG
ACTGCTGATG CTTTCGGCGT GTTGCCGCCG GTTTCTCGCC TGACTGCCGA TCAAACCCAG
TATCACTTCC TCTCTGGCTT CACCGCCAAA CTGGCCGGTA CTGAGCGTGG CATCACCGAA
CCGACGCCAA CCTTCTCCGC TTGCTTCGGC GCGGCATTCC TGTCGCTGCA CCCGACTCAG
TACGCAGAAG TGCTGGTGAA ACGTATGCAG GCGGCGGGCG CGCAGGCTTA TCTGGTTAAC
ACTGGCTGGA ACGGCACTGG CAAACGTATC TCGATTAAAG ATACCCGCGC CATTATCGAC
GCCATCCTCA ACGGTTCGCT GGATAATGCA GAAACCTTCA CTCTGCCGAT GTTTAACCTG
GCGATCCCAA CCGAACTGCC GGGCGTAGAC ACGAAGATTC TCGATCCGCG TAACACCTAC
GCTTCTCCGG AACAGTGGCA GGAAAAAGCC GAAACCCTGG CGAAACTGTT TATCGACAAC
TTCGATAAAT ACACCGACAC CCCTGCGGGT GCCGCGCTGG TAGCGGCTGG TCCGAAACTG
TAA
 
Protein sequence
MRVNNGLTPQ ELEAYGISDV HDIVYNPSYD LLYQEELDPS LTGYERGVLT NLGAVAVDTG 
IFTGRSPKDK YIVRDDTTRD TFWWADKGKG KNDNKPLSPE TWQHLKGLVT RQLSGKRLFV
VDAFCGANPD TRLSVRFITE VAWQAHFVKN MFIRPSDEEL AGFKPDFIVM NGAKCTNPQW
KEQGLNSENF VAFNLTERMQ LIGGTWYGGE MKKGMFSMMN YLLPLKGIAS MHCSANVGEK
GDVAVFFGLS GTGKTTLSTD PKRRLIGDDE HGWDDDGVFN FEGGCYAKTI KLSKEAEPEI
YNAIRRDALL ENVTVREDGT IDFDDGSKTE NTRVSYPIYH IDNIVKPVSK AGHATKVIFL
TADAFGVLPP VSRLTADQTQ YHFLSGFTAK LAGTERGITE PTPTFSACFG AAFLSLHPTQ
YAEVLVKRMQ AAGAQAYLVN TGWNGTGKRI SIKDTRAIID AILNGSLDNA ETFTLPMFNL
AIPTELPGVD TKILDPRNTY ASPEQWQEKA ETLAKLFIDN FDKYTDTPAG AALVAAGPKL