Gene EcolC_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0291 
Symbol 
ID6065820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp334406 
End bp335164 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content55% 
IMG OID641599690 
ProductDNA-binding transcriptional repressor GlpR 
Protein accessionYP_001723296 
Protein GI170018342 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA CACAACGTCA CAACGGTATT ATCGAACTGG TTAAACAGCA GGGTTATGTC 
AGTACCGAAG AGCTGGTAGA GCATTTCTCC GTCAGCCCGC AGACTATTCG CCGCGACCTC
AATGAGCTGG CGGAGCAAAA CCTGATCCTG CGCCATCATG GCGGTGCGGC GCTGCCTTCC
AGTTCGGTTA ACACGCCGTG GCACGATCGC AAGGCCACCC AGACCGAAGA AAAAGAGCGC
ATCGCCCGCA AAGTGGCGGA GCAAATCCCC AATGGCTCGA CGCTGTTTAT CGATATCGGC
ACCACGCCGG AAGCGGTAGC GCACGCACTG CTCAATCACA GCAATTTGCG CATTGTCACC
AACAATCTCA ACGTTGCTAA CACGTTGATG GTAAAAGAAG ATTTTCGCAT CATTCTCGCC
GGTGGCGAAT TACGCAGCCG CGATGGCGGG ATCATTGGCG AAGCGACGCT CGATTTTATC
TCCCAGTTCC GCCTTGATTT CGGCATTCTG GGGATAAGCG GCATCGATAG CGACGGCTCG
CTGCTGGAGT TCGATTACCA CGAAGTTCGC ACCAAACGCG CCATTATTGA GAACTCGCGC
CACGTTATGC TGGTTGTCGA TCACTCGAAA TTTGGCCGTA ACGCGATGGT CAATATGGGC
AGCATCAGCA TGGTAGATGC CGTCTACACC GACGCCCAGC CGCCAGTAAG CGTGATGCAG
GTGCTGACGG ACCACCATAT TCAACTGGAG CTGTGCTGA
 
Protein sequence
MKQTQRHNGI IELVKQQGYV STEELVEHFS VSPQTIRRDL NELAEQNLIL RHHGGAALPS 
SSVNTPWHDR KATQTEEKER IARKVAEQIP NGSTLFIDIG TTPEAVAHAL LNHSNLRIVT
NNLNVANTLM VKEDFRIILA GGELRSRDGG IIGEATLDFI SQFRLDFGIL GISGIDSDGS
LLEFDYHEVR TKRAIIENSR HVMLVVDHSK FGRNAMVNMG SISMVDAVYT DAQPPVSVMQ
VLTDHHIQLE LC