Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0260 |
Symbol | livM |
ID | 6067992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 297994 |
End bp | 299271 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641599659 |
Product | leucine/isoleucine/valine transporter permease subunit |
Protein accession | YP_001723266 |
Protein GI | 170018312 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGA TGCATATTGC AATGGCGCTG CTCTCTGCCG CGATGTTCTT TGTCCTCGCT GGCGTCTTTA TGGGCGTGCA ACTGGAGCTG GATGGCACCA AACTGGTGGT CGACAGCGCT TCGGATGTCC GTTGGCAGTG GGTGTTTATC GGCACGGCGG TGGTCTTTTT CTTTCAGCTT TTGCGACCTG CTTTCCAGAA AGGGTTGAAA AGTGTTTCCG GACCGAAGTT TATTCTGCCC GCCATTGATG GCTCCACGGT GAAGCAGAAA CTGTTCCTCG TGGCGCTGCT GGTGCTTGCG GTGGCGTGGC CGTTTATGGT GTCACGTGGG ACGGTGGATA TCGCCACTCT GACCATGATC TACATTATCC TCGGTCTCGG GCTGAATGTG GTTGTTGGTC TTTCTGGTCT GCTGGTGCTG GGGTACGGCG GTTTTTACGC CATCGGCGCT TACACCTTTG CGCTGCTCAA TCACTATTAC GGCTTGGGCT TCTGGACTTG TCTGCCGATT GCCGGGTTAA TGGCAGCGGC GGCGGGCTTC CTGCTCGGCT TTCCGGTGCT GCGTCTGCGT GGTGATTATC TGGCGATCGT TACCCTTGGC TTCGGCGAAA TTGTGCGCAT ATTGCTGCTC AATAACACCG AAATTACCGG CGGCCCGAAC GGAATCAGTC AGATCCCGAA ACCGACTTTC TTCGGCCTTG AGTTCAGCCG TACCGCTCGT GAAGGCGGCT GGGACACGTT CAGTAATTTC TTTGGCCTGA AATACGATCC CTCCGATCGC GTCATCTTCC TGTATCTGGT GGCGTTGCTG CTGGTGGTGC TAAGCCTGTT TGTCATTAAC CGCCTGCTGC GGATGCCGCT GGGGCGTGCG TGGGAAGCAT TGCGTGAAGA TGAAATTGCC TGCCGTTCGC TGGGCTTAAG CCCGCGTCGT ATCAAGCTGA CCGCCTTTAC CATCAGCGCC GCGTTTGCCG GTTTTGCCGG AACGCTGTTT GCGGCGCGTC AGGGCTTTGT CAGCCCGGAA TCCTTCACCT TTGCCGAATC GGCGTTTGTG CTGGCGATAG TGGTGCTCGG CGGTATGGGC TCGCAATTTG CGGTGATTCT GGCGGCAATT TTGCTGGTGG TGTCGCGCGA ATTGATGCGT GATTTCAACG AATACAGCAT GTTAATGCTC GGTGGTTTGA TGGTGCTGAT GATGATCTGG CGTCCGCAGG GCTTGCTGCC CATGACGCGC CCGCAACTGA AGCTGAAAAA CGGCGCAGCG AAAGGAGAGC AGGCATGA
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Protein sequence | MKPMHIAMAL LSAAMFFVLA GVFMGVQLEL DGTKLVVDSA SDVRWQWVFI GTAVVFFFQL LRPAFQKGLK SVSGPKFILP AIDGSTVKQK LFLVALLVLA VAWPFMVSRG TVDIATLTMI YIILGLGLNV VVGLSGLLVL GYGGFYAIGA YTFALLNHYY GLGFWTCLPI AGLMAAAAGF LLGFPVLRLR GDYLAIVTLG FGEIVRILLL NNTEITGGPN GISQIPKPTF FGLEFSRTAR EGGWDTFSNF FGLKYDPSDR VIFLYLVALL LVVLSLFVIN RLLRMPLGRA WEALREDEIA CRSLGLSPRR IKLTAFTISA AFAGFAGTLF AARQGFVSPE SFTFAESAFV LAIVVLGGMG SQFAVILAAI LLVVSRELMR DFNEYSMLML GGLMVLMMIW RPQGLLPMTR PQLKLKNGAA KGEQA
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