Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0251 |
Symbol | rsmD |
ID | 6067892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 288471 |
End bp | 289067 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641599650 |
Product | 16S rRNA m(2)G966-methyltransferase |
Protein accession | YP_001723257 |
Protein GI | 170018303 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC CGAATCATTC CGGCAGCGGC CAAATCCGCA TTATTGGCGG GCAGTGGCGA GGCCGTAAAC TCCCGGTTCC TGATAGCCCA GGTCTGCGCC CCACCACCGA CCGCGTACGC GAAACGTTGT TTAACTGGCT GGCTCCGGTC ATTGTTGACG CCCAATGTCT GGATTGCTTC GCCGGGAGCG GCGCGCTGGG ACTGGAAGCG TTATCGCGCT ACGCTGCGGG GGCCACGTTG ATTGAGATGG ATCGCGCGGT TTCTCAGCAG TTAATTAAGA ATCTGGCGAC ACTAAAAGCA GGCAATGCAC GCGTGGTGAA CAGCAACGCG ATGTCATTCC TGGCGCAAAA AGGTACACCG CATAATATCG TGTTTGTCGA TCCACCGTTC CGCCGTGGCT TGTTAGAAGA GACGATAAAT TTACTGGAAG ATAACGGCTG GCTGGCTGAC GAAGCCCTGA TTTATGTCGA AAGCGAAGTC GAAAACGGTC TGCCCACTGT TCCGGCAAAC TGGTCATTAC ATCGGGAAAA AGTGGCGGGT CAGGTGGCTT ATCGGCTGTA TCAACGCGAA GCACAAGGAG AAAGTGATGC TGATTAA
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Protein sequence | MKKPNHSGSG QIRIIGGQWR GRKLPVPDSP GLRPTTDRVR ETLFNWLAPV IVDAQCLDCF AGSGALGLEA LSRYAAGATL IEMDRAVSQQ LIKNLATLKA GNARVVNSNA MSFLAQKGTP HNIVFVDPPF RRGLLEETIN LLEDNGWLAD EALIYVESEV ENGLPTVPAN WSLHREKVAG QVAYRLYQRE AQGESDAD
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