Gene EcolC_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0229 
Symbol 
ID6064543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp263922 
End bp266657 
Gene Length2736 bp 
Protein Length911 aa 
Translation table11 
GC content56% 
IMG OID641599630 
ProductABC transporter related 
Protein accessionYP_001723237 
Protein GI170018283 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCATC TGGAACTGGT TCCCGTCCCG CCTGTCGCGC AACTGGCGGG CGTGAGCCAG 
CATTATGGAA AAACCGTTGC GCTGAACAAT ATCACTCTCG ATATTCCGGC CCGTTGCATG
GTCGGGCTGA TTGGTCCGGA TGGCGTCGGG AAGTCGAGTT TATTGTCACT GATTTCCGGT
GCCCGCGTCA TTGAGCAGGG CAATGTGGTG GTGCTGGGTG GCGATATGCA CGACCCGAAG
CATCGCCGAG ACGTCTGCCC GCGCATCGCC TGGATGCCGC AGGGGCTGGG CAAAAACCTC
TACCACACCT TGTCGGTGTA TGAAAACGTC GATTTTTTCG CTCGCCTGTT CGGTCACGAC
AAAGCGGAGC GGGAAGTGCG AATTAATGAG CTGCTGACCA GCACGGGGTT AGCACCGTTT
CGCGATCGTC CGGCAGGGAA ACTCTCCGGC GGGATGAAGC AAAAACTTGG GCTGTGCTGC
GCGTTAATCC ACGACCCGGA ACTGTTGATC CTTGATGAGC CAACAACGGG GGTTGACCCG
CTCTCCCGCT CCCAGTTCTG GGATCTGATC GATAGTATTC GCCAGCGGCA GAGCAATATG
AGCGTGCTGG TCGCCACCGC CTATATGGAA GAGGCCGAAC GCTTCGACTG GCTGGTAGCG
ATGAATGCCG GAGAAGTGCT GGCAACTGGC AGCGCCGAAG AGCTACGGCA GCAAACGCAA
AGCGCTACGC TGGAAGAAGC ATTTATAAAT CTGTTACCGC AAGCGCAACG CCAGGCGCAT
CAGGCGGTAG TGATCCCACC GTATCAACCT GAAAACGCAG AGATTGCCAT CGAAGCGCGC
GATCTGACCA TGCGTTTTGG TTCCTTCGTT GCCGTTGATC ACGTTAATTT CCGCATTCCA
CGCGGGGAGA TTTTTGGTTT TCTTGGTTCG AACGGCTGCG GTAAATCCAC CACCATGAAA
ATGCTCACCG GACTGCTGCC CGCCAGCGAA GGTGAGGCGT GGCTGTTCGG GCAACCGGTT
GATCCAAAAG ATATCGATAC CCGCCGTCGG GTGGGCTATA TGTCGCAGGC GTTTTCGCTC
TATAACGAAC TCACCGTGCG GCAAAACCTT GAGTTACATG CCCGTTTGTT TCACATCCCG
GAAGCGGAAA TTCCCGCAAG AGTGGCTGAA ATGAGCGAGC GTTTTAAGCT CAACGACGTT
GAAGATATTC TGCCGGAGTC ATTGCCGCTC GGCATTCGCC AGCGGCTTTC GCTGGCGGTG
GCGGTGATTC ATCGCCCGGA GATGTTAATC CTCGATGAGC CTACTTCTGG TGTCGATCCG
GTGGCGAGGG ATATGTTCTG GCAGTTGATG GTCGATCTCT CGCGCCAGGA CAAAGTGACT
ATCTTCATCT CCACCCACTT TATGAACGAA GCGGAACGTT GCGACCGCAT CTCACTGATG
CACGCCGGAA AAGTGCTTGC CAGCGGTACA CCGCAGGAAC TGGTTGAGAA ACGCGGAGCC
GCCAGTCTGG AAGAGGCATT TATCGCCTAT TTGCAGGAAG CGGCAGGGCA GAGCAACGAA
GCCGAAGCGC CGCCCGTGGT ACACGACACC ACCCACGCGC CGCGTCAGGG ATTTAGCCTG
CGCCGTCTGT TTAGCTACAG CCGCCGCGAA GCGCTGGAAC TGCGACGCGA TCCAGTACGT
TCGACGCTGG CGCTGATGGG AACGGTGATC CTGATGCTGA TAATGGGTTA CGGCATCAGT
ATGGATGTGG AAAACCTGCG CTTTGCGGTG CTCGACCGCG ACCAGACCGT CAGTAGCCAG
GCGTGGACAC TCAACCTCTC CGGTTCCCGT TACTTTATCG AACAGCCGCC GCTCACCAGT
TATGACGAGC TTGATCGTCG GATGCGTGCG GGCGATATCA CGGTGGCGAT TGAGATCCCG
CCCAATTTCG GGCGCGATAT CGCGCGTGGT ACGCCTGTGG AACTCGGCGT CTGGATCGAC
GGAGCGATGC CCAGTCGTGC CGAAACGGTA AAAGGTTACG TGCAGGCAAT GCACCAGAGT
TGGCTTCAGG ATGTGGCGAG CCGACAATCG ACACCCGCCA GCCAAAGCGG GCTGATGAAC
ATTGAGACGC GTTATCGCTA TAACCCGGAC GTAAAAAGCC TGCCAGCGAT TGTTCCGGCG
GTGATCCCGC TTCTGCTGAT GATGATCCCG TCAATGCTAA GCGCCCTTAG CGTGGTGCGG
GAAAAAGAGC TTGGGTCGAT TATCAACCTT TACGTGACCC CCACCACGCG TAGTGAATTT
TTGCTTGGTA AACAGTTGCC ATACATCGCG CTGGGGATGC TGAACTTTTT CCTGCTCTGC
GGCCTGTCGG TGTTTGTGTT TGGCGTACCG CATAAAGGCA GTTTCCTGAC GCTCACCCTG
GCGGCGCTGC TGTATATCAT CATTGCCACC GGAATGGGGC TGCTGATCTC CACCTTTATG
AAAAGCCAGA TTGCCGCCAT TTTCGGAACG GCGATTATCA CGTTGATCCC GGCGACACAG
TTTTCCGGGA TGATCGATCC GGTAGCTTCG CTGGAAGGGC CTGGACGTTG GATCGGCGAG
GTTTACCCGA CCAGTCATTT TCTGATTATC GCCCGCGGGA CGTTCTCGAA AGCGCTGGAT
CTGACTGATT TGTGGCAACT TTTTATCCCG TTGCTGATAG CCATCCCGCT GGTGATGGGC
TTAAGTATCC TGCTGCTGAA AAAACAGGAG GGATGA
 
Protein sequence
MTHLELVPVP PVAQLAGVSQ HYGKTVALNN ITLDIPARCM VGLIGPDGVG KSSLLSLISG 
ARVIEQGNVV VLGGDMHDPK HRRDVCPRIA WMPQGLGKNL YHTLSVYENV DFFARLFGHD
KAEREVRINE LLTSTGLAPF RDRPAGKLSG GMKQKLGLCC ALIHDPELLI LDEPTTGVDP
LSRSQFWDLI DSIRQRQSNM SVLVATAYME EAERFDWLVA MNAGEVLATG SAEELRQQTQ
SATLEEAFIN LLPQAQRQAH QAVVIPPYQP ENAEIAIEAR DLTMRFGSFV AVDHVNFRIP
RGEIFGFLGS NGCGKSTTMK MLTGLLPASE GEAWLFGQPV DPKDIDTRRR VGYMSQAFSL
YNELTVRQNL ELHARLFHIP EAEIPARVAE MSERFKLNDV EDILPESLPL GIRQRLSLAV
AVIHRPEMLI LDEPTSGVDP VARDMFWQLM VDLSRQDKVT IFISTHFMNE AERCDRISLM
HAGKVLASGT PQELVEKRGA ASLEEAFIAY LQEAAGQSNE AEAPPVVHDT THAPRQGFSL
RRLFSYSRRE ALELRRDPVR STLALMGTVI LMLIMGYGIS MDVENLRFAV LDRDQTVSSQ
AWTLNLSGSR YFIEQPPLTS YDELDRRMRA GDITVAIEIP PNFGRDIARG TPVELGVWID
GAMPSRAETV KGYVQAMHQS WLQDVASRQS TPASQSGLMN IETRYRYNPD VKSLPAIVPA
VIPLLLMMIP SMLSALSVVR EKELGSIINL YVTPTTRSEF LLGKQLPYIA LGMLNFFLLC
GLSVFVFGVP HKGSFLTLTL AALLYIIIAT GMGLLISTFM KSQIAAIFGT AIITLIPATQ
FSGMIDPVAS LEGPGRWIGE VYPTSHFLII ARGTFSKALD LTDLWQLFIP LLIAIPLVMG
LSILLLKKQE G