| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0228 |
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| Symbol | |
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| ID | 6064544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 262858 |
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| End bp | 263925 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641599629 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001723236 |
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| Protein GI | 170018282 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA GTAAGCGCCA TCTGGCGTGG TGGGTTGTCG GGTTACTGGC GGTGGCGGCT
ATCGTGGCGT GGTGGCTGTT GCGCCCGGCA GGTGTGCCGG AAGGCTTTGC CGTCAGCAAT
GGGCGCATTG AAGCGACGGA AGTGGATATC GCCAGCAAAA TTGCCGGGCG TATCGACACC
ATTCTGGTGA AAGAAGGCCA GTTTGTTCGC GAAGGCGAAG TGCTGGCGAA GATGGATACT
CGCGTGTTGC AGGAACAGCG ACTGGAAGCC ATCGCGCAAA TCAAAGAAGC ACAAAGTGCC
GTTGCTGCCG CGCAGGCTTT GCTGGAGCAA CGGCAAAGCG AAACTCGTGC CGCGCAGTCG
CTGGTTAATC AACGCCAGGC CGAACTGGAC TCCGTGGCTA AACGTCATAC GCGTTCCCGC
TCGCTCGCCC AACGAGGGGC TATTTCTGCG CAACAGCTGG ATGACGATCG CGCCGCCGCT
GAGAGCGCCC GAGCTGCGCT GGAATCGGCG AAAGCTCAGG TATCGGCTTC TAAAGCGGCT
ATAGAAGCGG CACGCACCAA TATCATTCAG GCGCAAACTC GCGTCGAAGC CGCACAAGCC
ACTGAACGGC GCATTGCCGC AGATATCGAT GACAGCGAAC TGAAAGCCCC GCGTGATGGA
CGCGTACAAT ATCGCGTTGC CGAGCCAGGG GAAGTGCTGG CGGCAGGCGG TCGGGTGCTG
AATATGGTCG ATCTCAGCGA CGTCTATATG ACTTTCTTCC TGCCAACCGA ACAGGCGGGC
ACGCTGAAAC TTGGCGGTGA AGCCCGGCTG ATCCTCGATG CCGCGCCAGA TCTGCGTATT
CCGGCGACCA TCAGTTTTGT CGCCAGTGTC GCCCAGTTCA CGCCAAAAAC CGTCGAAACC
AGCGATGAAC GGCTGAAACT GATGTTCCGC GTCAAAGCGC GTATCCCACC GGAATTACTC
CAGCAGCATC TGGAATATGT CAAAACCGGT TTACCGGGCG TAGCGTGGGT GCGGGTGAAT
GAAGAACTTC CGTGGCCTGA CGACCTCGTG GTGAGGTTGC CGCAATGA
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| Protein sequence | MDKSKRHLAW WVVGLLAVAA IVAWWLLRPA GVPEGFAVSN GRIEATEVDI ASKIAGRIDT
ILVKEGQFVR EGEVLAKMDT RVLQEQRLEA IAQIKEAQSA VAAAQALLEQ RQSETRAAQS
LVNQRQAELD SVAKRHTRSR SLAQRGAISA QQLDDDRAAA ESARAALESA KAQVSASKAA
IEAARTNIIQ AQTRVEAAQA TERRIAADID DSELKAPRDG RVQYRVAEPG EVLAAGGRVL
NMVDLSDVYM TFFLPTEQAG TLKLGGEARL ILDAAPDLRI PATISFVASV AQFTPKTVET
SDERLKLMFR VKARIPPELL QQHLEYVKTG LPGVAWVRVN EELPWPDDLV VRLPQ
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