Gene EcolC_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0217 
Symbol 
ID6066692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp247229 
End bp248071 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content54% 
IMG OID641599618 
Producthypothetical protein 
Protein accessionYP_001723225 
Protein GI170018271 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGTT ATCGCCACAG CTTTCACGCT GGCAACCACG CCGACGTCCT TAAACATACC 
GTTCAGAGCC TGATCATCGA GTCGCTGAAA GAGAAAGATA AACCGTTTCT CTATCTCGAC
ACCCACGCAG GGGCCGGGCG TTATCAGTTA GGCAGCGAAC ATGCCGAGCG TACCGGCGAA
TATCTCGAAG GCATCGCCCG TATCTGGCAG CAGGACGATT TGCCCGCAGA ACTGGAGGCG
TACATCAATG TGGTAAAACA CTTCAACCGT AGCGGTCAGT TGCGTTACTA CCCCGGTTCG
CCGTTGATTG CTCGCCTGCT ACTGCGTGAA CAGGACAGCC TGCAACTGAC CGAACTGCAC
CCGAGCGATT ACCCGTTGTT GCGTTCTGAA TTTCAGAAAG ATAGCCGTGC GCGTGTCGAA
AAAGCCGACG GTTTCCAGCA GCTTAAGGCC AAACTGCCGC CGGTTTCCCG CCGTGGTTTA
ATCCTTATCG ACCCGCCGTA TGAAATGAAA ACTGACTATC AAGCGGTGGT CAGCGGGATA
GCAGAAGGTT ACAAACGTTT CGCCACTGGT ATTTACGCAC TGTGGTATCC GGTGGTGCTG
CGTCAGCAAA TTAAGCGCAT GATCCACGAT CTGGAAGCGA CCGGTATTCG CAAAATTCTG
CAAATTGAAC TGGCGGTACT GCCAGACAGC GATCGCCGTG GCATGACCGC TTCCGGCATG
ATTGTGATTA ACCCGCCGTG GAAACTGGAA CAACAGATGA ATAACGTGCT GCCGTGGCTG
CACAGCAAAC TGGTTCCGGC AGGCACCGGG CACGCCACCG TAAGCTGGAT CGTGCCGGAG
TAA
 
Protein sequence
MLSYRHSFHA GNHADVLKHT VQSLIIESLK EKDKPFLYLD THAGAGRYQL GSEHAERTGE 
YLEGIARIWQ QDDLPAELEA YINVVKHFNR SGQLRYYPGS PLIARLLLRE QDSLQLTELH
PSDYPLLRSE FQKDSRARVE KADGFQQLKA KLPPVSRRGL ILIDPPYEMK TDYQAVVSGI
AEGYKRFATG IYALWYPVVL RQQIKRMIHD LEATGIRKIL QIELAVLPDS DRRGMTASGM
IVINPPWKLE QQMNNVLPWL HSKLVPAGTG HATVSWIVPE