Gene EcolC_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0189 
Symbol 
ID6064418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp211207 
End bp212493 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content52% 
IMG OID641599590 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_001723197 
Protein GI170018243 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT CTCTGTTTAA AAGCCTTTAC TTTCAGGTCC TGACAGCGAT AGCCATTGGT 
ATTCTCCTTG GCCATTTCTA TCCTGAAATA GGCGAGCAAA TGAAACCGCT TGGCGACGGC
TTCGTTAAGC TCATTAAGAT GATCATCGCT CCTGTCATCT TTTGTACCGT CGTAACGGGC
ATTGCGGGCA TGGAAAGCAT GAAGGCGGTC GGTCGTACCG GCGCAGTCGC ACTGCTTTAC
TTTGAAATTG TCAGTACCAT CGCGCTGATT ATTGGTCTTA TCATCGTTAA CGTCGTGCAG
CCTGGTGCCG GAATGAACGT CGATCCGGCA ACGCTTGATG CGAAAGCGGT AGCGGTTTAC
GCCGATCAGG CGAAAGACCA GGGCATTGTC GCCTTCATTA TGGATGTCAT CCCGGCGAGC
GTCATTGGCG CATTTGCCAG CGGTAACATT CTGCAGGTGC TGCTGTTTGC CGTACTGTTT
GGTTTTGCGC TCCACCGTCT GGGCAGCAAA GGCCAACTGA TTTTTAACGT CATCGAAAGT
TTCTCGCAGG TCATCTTCGG CATCATCAAT ATGATCATGC GTCTGGCACC TATTGGTGCG
TTCGGGGCAA TGGCGTTTAC CATCGGTAAA TACGGCGTCG GCACACTGGT GCAACTGGGG
CAGCTGATTA TCTGTTTCTA CATTACCTGT ATCCTGTTTG TGGTGCTGGT ATTGGGTTCA
ATCGCTAAAG CGACTGGTTT CAGTATCTTC AAATTTATCC GCTACATCCG TGAAGAACTG
CTGATTGTAC TGGGGACTTC ATCTTCCGAG TCGGCGCTGC CGCGTATGCT CGACAAGATG
GAGAAACTCG GCTGCCGTAA ATCGGTGGTG GGGCTGGTCA TCCCGACAGG CTACTCGTTT
AACCTTGATG GCACATCGAT ATACCTGACA ATGGCGGCGG TGTTTATCGC CCAGGCCACT
AACAGTCAGA TGGATATCGT CCACCAAATC ACGCTGTTAA TCGTGTTGCT GCTTTCTTCT
AAAGGGGCGG CAGGGGTAAC GGGTAGTGGC TTTATCGTGC TGGCGGCGAC GCTCTCTGCG
GTGGGCCATT TGCCGGTAGC GGGTCTGGCG CTGATCCTCG GTATCGACCG CTTTATGTCA
GAAGCTCGTG CGCTGACTAA CCTGGTCGGT AACGGCGTAG CGACCATTGT CGTTGCTAAG
TGGGTGAAAG AACTGGACCA CAAAAAACTG GACGATGTGC TGAATAATCG TGCGCCGGAT
GGCAAAACGC ACGAATTATC CTCTTAA
 
Protein sequence
MKTSLFKSLY FQVLTAIAIG ILLGHFYPEI GEQMKPLGDG FVKLIKMIIA PVIFCTVVTG 
IAGMESMKAV GRTGAVALLY FEIVSTIALI IGLIIVNVVQ PGAGMNVDPA TLDAKAVAVY
ADQAKDQGIV AFIMDVIPAS VIGAFASGNI LQVLLFAVLF GFALHRLGSK GQLIFNVIES
FSQVIFGIIN MIMRLAPIGA FGAMAFTIGK YGVGTLVQLG QLIICFYITC ILFVVLVLGS
IAKATGFSIF KFIRYIREEL LIVLGTSSSE SALPRMLDKM EKLGCRKSVV GLVIPTGYSF
NLDGTSIYLT MAAVFIAQAT NSQMDIVHQI TLLIVLLLSS KGAAGVTGSG FIVLAATLSA
VGHLPVAGLA LILGIDRFMS EARALTNLVG NGVATIVVAK WVKELDHKKL DDVLNNRAPD
GKTHELSS