| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0188 |
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| Symbol | |
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| ID | 6067284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 209036 |
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| End bp | 211024 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641599589 |
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| Product | putative phosphodiesterase |
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| Protein accession | YP_001723196 |
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| Protein GI | 170018242 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCGTAA GTCGCTCGTT AACAATCAAG CAGATGGCAA TGGTGGCAGC CGTTGTCCTG
GTGTTCGTTT TTATTTTTTG CACCGTTTTG CTGTTCCATC TGGTCCAGCA GAATCGCTAT
AACACGGCTA CGCAACTGGA AAGCATTGCT CGCTCTGTCC GCGAACCCTT ATCTTCAGCT
ATTTTGAAAG GCGATATTCC CGAAGCGGAA GCTATTCTTG CCAGCATTAA ACCGGCAGGC
GTGGTCAGCC GTGCCGATGT AGTGCTGCCT AACCAGTTCC AGGCGCTGCG TAAAAGTTTT
ATTCCAGAGC GCCCGGTGCC GGTAATGGTT ACTCGCCTGT TTGAGCTACC GGTTCAAATC
TCGCTGGGCG TTTACTCGCT CGAACGTCCG GCAAACCCGC AGCCAATTGC CTATCTGGTA
CTACAGGCGG ATTCCTTCCG TATGTATAAG TTCGTGATGA GCACCCTCTC AACGTTAGTG
ACCATTTACT TACTTTTGTC GCTTATCCTG ACCGTCGCCA TCAGCTGGTG CATTAACCGC
CTGATTTTGC ATCCGTTACG CAATATTGCT CGCGAACTTA ACGCCATCCC AGCCAAGGAG
CTTGTTGGTC ACCAACTGGC ATTACCGCGT CTGCATCAGG ACGATGAAAT CGGTATGTTG
GTGCGCAGTT ACAACCTCAA CCAGCAATTG CTGCAGCGCC ATTATGAAGA ACAGAACGAA
AATGCGATGC GCTTCCCGGT GTCGGATTTG CCGAACAAAG CCTTGCTGAT GGAGATGCTG
GAGCAGGTTG TCGCGCGTAA ACAAACCACC GCGCTGATGA TCATCACCTG TGAAACCCTG
CGTGATACTG CGGGCGTGCT GAAAGAGGCG CAACGAGAAA TTCTGCTGCT GACGCTGGTG
GAAAAACTCA AATCGGTACT GTCGCCACGT ATGATCCTCG CGCAGATTAG CGGTTATGAC
TTTGCTGTCA TTGCCAACGG TGTACAGGAA CCGTGGCACG CAATCACCTT AGGTCAGCAA
GTGCTCACTA TCATGAGCGA GCGCCTGCCG ATTGAACGTA TTCAACTCCG TCCGCACTGT
AGCATTGGCG TGGCGATGTT CTACGGCGAT CTCACCGCCG AACAGCTTTA CAGTCGCGCT
ATTTCTGCGG CATTTACCGC TCGCCATAAA GGCAAGAATC AGATTCAGTT CTTTGATCCG
CAGCAGATGG AAGCCGCCCA GAAGCGGTTG ACGGAAGAGA GCGATATCCT TAATGCACTG
GAAAATCATC AGTTTGCTAT TTGGTTACAG CCACAGGTCG AGATGACCAG CGGTAAACTG
GTCAGTGCGG AAGTGTTACT GCGTATCCAG CAACCGGATG GCAGTTGGGA CCTGCCGGAT
GGCTTAATCG ATCGCATTGA GTGCTGTGGG CTGATGGTTA CCGTCGGTCA CTGGGTGCTG
GAAGAGTCCT GTCGATTGCT TGCAGCCTGG CAAGAGCGCG GCATTATGCT GCCCTTGTCG
GTAAACCTCT CTGCGCTGCA ACTGATGCAC CCGAATATGG TGGCGGATAT GCTGGAACTG
TTAACCCGCT ATCGCATTCA GCCGGGAACA CTGATTCTGG AAGTGACAGA AAGCCGACGT
ATTGACGACC CTCATGCTGC GGTGGCAATC CTCCGTCCGC TGCGCAATGC CGGAGTTCGG
GTGGCGCTGG ATGATTTCGG CATGGGCTAC GCAGGGCTGC GTCAGCTGCA GCATATGAAA
TCGTTGCCAA TCGACGTACT GAAAATCGAC AAAATGTTTG TTGAAGGCTT GCCGGGAGAT
AGCAGCATGA TTGCTGCAAT TATCATGCTG GCGCAGAGCC TGAACTTACA AATGATTGCC
GAAGGCGTGG AGACTGAAGC ACAACGCGAC TGGCTGGCAA AAGCGGGCGT TGGTATTGCC
CAGGGCTTCC TTTTTGCTCG CCCACTCCCT ATTGAAATCT TCGAAGAGAG TTACCTGGAA
GAAAAGTAG
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| Protein sequence | MRVSRSLTIK QMAMVAAVVL VFVFIFCTVL LFHLVQQNRY NTATQLESIA RSVREPLSSA
ILKGDIPEAE AILASIKPAG VVSRADVVLP NQFQALRKSF IPERPVPVMV TRLFELPVQI
SLGVYSLERP ANPQPIAYLV LQADSFRMYK FVMSTLSTLV TIYLLLSLIL TVAISWCINR
LILHPLRNIA RELNAIPAKE LVGHQLALPR LHQDDEIGML VRSYNLNQQL LQRHYEEQNE
NAMRFPVSDL PNKALLMEML EQVVARKQTT ALMIITCETL RDTAGVLKEA QREILLLTLV
EKLKSVLSPR MILAQISGYD FAVIANGVQE PWHAITLGQQ VLTIMSERLP IERIQLRPHC
SIGVAMFYGD LTAEQLYSRA ISAAFTARHK GKNQIQFFDP QQMEAAQKRL TEESDILNAL
ENHQFAIWLQ PQVEMTSGKL VSAEVLLRIQ QPDGSWDLPD GLIDRIECCG LMVTVGHWVL
EESCRLLAAW QERGIMLPLS VNLSALQLMH PNMVADMLEL LTRYRIQPGT LILEVTESRR
IDDPHAAVAI LRPLRNAGVR VALDDFGMGY AGLRQLQHMK SLPIDVLKID KMFVEGLPGD
SSMIAAIIML AQSLNLQMIA EGVETEAQRD WLAKAGVGIA QGFLFARPLP IEIFEESYLE
EK
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