Gene EcolC_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0169 
Symbol 
ID6068276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp182647 
End bp183855 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content51% 
IMG OID641599569 
Productoxalate/formate antiporter 
Protein accessionYP_001723178 
Protein GI170018224 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID[TIGR00890] Oxalate/Formate Antiporter 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.86802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCTT CAAATTATCA GCGTACCCGC TGGCTGACAC TCATCGGTAC TATCATTACC 
CAGTTTGCGC TGGGGTCGGT TTATACCTGG AGCCTGTTTA ATGGCGCGCT TTCCGCCAAG
CTGGATGCGC CGGTAAGCCA GGTCGCTTTC TCTTTCGGCT TGTTAAGTCT GGGGCTGGCA
ATTTCGTCTT CTGTTGCGGG CAAATTACAG GAACGTTTTG GCGTTAAACG CGTCACCATG
GCTTCCGGCA TTTTGCTGGG ATTAGGCTTC TTCCTGACAG CGCATTCTGA CAACCTGATG
ATGCTGTGGT TAAGCGCCGG TGTGCTGGTG GGACTGGCAG ATGGCGCGGG TTATCTGCTG
ACGCTCTCTA ACTGTGTGAA GTGGTTCCCG GAGCGTAAAG GTCTGATCTC CGCGTTCGCT
ATCGGTTCTT ATGGTCTGGG TAGCCTGGGT TTCAAATTTA TCGACACGCA GCTGCTGGAA
ACGGTCGGTC TGGAAAAAAC CTTTGTGATT TGGGGAGCGA TTGCGCTGTT GATGATTGTT
TTCGGCGCAA CGTTAATGAA AGACGCACCA AAACAGGAAG TGAAAACCAG CAATGGTGTG
GTGGAGAAAG ATTACACGCT GGCAGAGTCG ATGCGTAAAC CGCAGTACTG GATGTTAGCG
GTAATGTTCC TGACCGCCTG CATGAGCGGC CTGTACGTGA TTGGGGTAGC GAAAGATATC
GCCCAAAGTC TGGCACACCT TGATGTGGTT TCCGCAGCCA ATGCAGTCAC TGTTATTTCC
ATCGCCAACC TTTCAGGTCG TCTGGTGCTG GGTATTCTGT CTGACAAAAT CGCCCGTATC
CGTGTTATTA CCATTGGTCA GGTGATATCG CTGGTGGGTA TGGCGGCCCT GCTGTTTGCA
CCATTGAATG CAGTGACGTT CTTTGCAGCG ATTGCCTGCG TGGCATTTAA CTTTGGCGGC
ACTATTACCG TCTTTCCGTC ACTGGTCAGT GAGTTCTTTG GCCTCAATAA CCTGGCGAAA
AACTACGGTG TGATTTATCT CGGTTTCGGT ATCGGTAGCA TTTGTGGTTC GATTATCGCC
TCACTGTTTG GCGGCTTCTA TGTGACCTTC TACGTGATTT TCGCCCTGCT GATTCTGTCA
TTGGCGCTTT CTACGACGAT TCGTCAGCCA GAGCAGAAAA TGTTGCGTGA GGCGCATGGC
TCCCTTTAA
 
Protein sequence
MTPSNYQRTR WLTLIGTIIT QFALGSVYTW SLFNGALSAK LDAPVSQVAF SFGLLSLGLA 
ISSSVAGKLQ ERFGVKRVTM ASGILLGLGF FLTAHSDNLM MLWLSAGVLV GLADGAGYLL
TLSNCVKWFP ERKGLISAFA IGSYGLGSLG FKFIDTQLLE TVGLEKTFVI WGAIALLMIV
FGATLMKDAP KQEVKTSNGV VEKDYTLAES MRKPQYWMLA VMFLTACMSG LYVIGVAKDI
AQSLAHLDVV SAANAVTVIS IANLSGRLVL GILSDKIARI RVITIGQVIS LVGMAALLFA
PLNAVTFFAA IACVAFNFGG TITVFPSLVS EFFGLNNLAK NYGVIYLGFG IGSICGSIIA
SLFGGFYVTF YVIFALLILS LALSTTIRQP EQKMLREAHG SL