Gene EcolC_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0168 
Symbol 
ID6068281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp181720 
End bp182418 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content50% 
IMG OID641599568 
Productputative lipase 
Protein accessionYP_001723177 
Protein GI170018223 
COG category[N] Cell motility 
COG ID[COG5571] Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATAA AAAAAAGCGG TGGTCGCTGG CAGCTAAGCC TGCTGGCGAG CGTGGTAATC 
AGTGCCTTTT TTCTCAACAC AGCTTACGCC TGGCAACAAG AATATATCGT TGATACGCAA
CCCGGACTTT CCACAGAGCG TTACACCTGG GATAGTGATC ATCAACCTGA TTACAACGAT
ATTTTGTCGC AACGTATTCA AAGTAGCCAA AGGGCGCTGG GACTGGAAGT CAATCTGGCG
GAAGAAACCC CTGTGGATGT GACCAGCAGT ATGAGTATGG GCTGGAATTT TCCTTTATAT
GAACAGGTTA CAACCGGCCC GGTCGCGGCA TTACATTACG ATGGCACAAC CACCTCGATG
TATAACGAGT TTGGCGACAG TACTACCACG CTGACCGATC CGTTATGGCA TGCCAGCGTG
AGTACCTTAG GCTGGCGTGT TGACTCCCGG CTTGGCGATC TCCGACCCTG GGCGCAAATC
AGCTATAACC AGCAATTTGG CGAGAATATC TGGAAGGCGC AATCAGGCCT GAGCCGGATG
ACGGCGACAA ACCAGAACGG CAACTGGCTG GATGTCACCG TAGGCGCTGA TATGTTGCTC
AATCAAAATA TTGCCGCCTA TGCCGCGCTA ACTCAGGCAG AAAATACCAC TAATAATAGC
GACTATCTGT ATACGATGGG GGTTAGCGCC AGATTTTAA
 
Protein sequence
MIIKKSGGRW QLSLLASVVI SAFFLNTAYA WQQEYIVDTQ PGLSTERYTW DSDHQPDYND 
ILSQRIQSSQ RALGLEVNLA EETPVDVTSS MSMGWNFPLY EQVTTGPVAA LHYDGTTTSM
YNEFGDSTTT LTDPLWHASV STLGWRVDSR LGDLRPWAQI SYNQQFGENI WKAQSGLSRM
TATNQNGNWL DVTVGADMLL NQNIAAYAAL TQAENTTNNS DYLYTMGVSA RF