Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0157 |
Symbol | |
ID | 6068273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 172786 |
End bp | 173589 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641599557 |
Product | integrase catalytic region |
Protein accession | YP_001723166 |
Protein GI | 170018212 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTCGGG TACTGAATGT CGCCCGGGCC GGGTTCTATG CGTGGCTGCA TAACCCTGTC TCGGCGCGTG ATAAAGATAA CCAGCGCCTG CTGATGCTTA TCCGCGACTC ATATTCCCTG AGCGGAGGCG TATACGGTTA TCGACGGGTT CATGGCGATC TGAACGAAAT CGGGGAAACC TGCGGTAAAA ACCGGGTGGG TCGGATCATG CAACTGAACC GGATTAAAGC TGTGCGCGGC TATAAAGCTC CACGTCGTAT CGCTGGCAGG CCTTCAGTCG TTGCTCCTAA TCGCGTGCAG CGGCAGTTCA CCGTTGTCCG GGCCAACCAG GTCTGGGTCA CTGATATTAC TTATATCCGC ACCTGGCAGG GCTGGCTGTA TCTGGCGGTG GTTATCGATC TCTTCGCCCG TAATGTGGTC GGCTGGTCGA TGAAACCCAC TCTCTCACGC GAACTGGCGC TCGACGCGCT GATGATGGCG GTCTGGCGCC GAAAACCAGA CGGCGAGGTC ATCGTACATA GCGATCAAGG TAGTCAGTAC GGCAGTGACG ACTGGCAGCG CTTCTGCCGG GCCAATAACC TGGCACCGAG CATGAGCCGG CGTGGCAACT GCTGGGATAA TGCGGTGGCC GAATCGTTCT TCAGTTCACT GAAAAAAGAA CGCATCAGGA AGAGAATATA CAAAACCCGG GATCTGGCCC GGGCGGATAT CTTCGATTAC ATTGAAGTGT TCTACAACCG GGCCCGGCGC CACAGTCACC TCGGTGGCGT CAGTCCGGAG GCCTTCGAAC AGGCCTCATC GTGA
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Protein sequence | MCRVLNVARA GFYAWLHNPV SARDKDNQRL LMLIRDSYSL SGGVYGYRRV HGDLNEIGET CGKNRVGRIM QLNRIKAVRG YKAPRRIAGR PSVVAPNRVQ RQFTVVRANQ VWVTDITYIR TWQGWLYLAV VIDLFARNVV GWSMKPTLSR ELALDALMMA VWRRKPDGEV IVHSDQGSQY GSDDWQRFCR ANNLAPSMSR RGNCWDNAVA ESFFSSLKKE RIRKRIYKTR DLARADIFDY IEVFYNRARR HSHLGGVSPE AFEQASS
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