| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0147 |
|---|
| Symbol | |
|---|
| ID | 6068295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 161084 |
|---|
| End bp | 162625 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641599547 |
|---|
| Product | xylose transporter ATP-binding subunit |
|---|
| Protein accession | YP_001723156 |
|---|
| Protein GI | 170018202 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02633] D-xylose ABC transporter, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTATC TACTTGAAAT GAAGAACATT ACCAAAACCT TCGGCAGTGT GAAGGCGATT
GATAACGTCT GCTTGCGGTT GAATGCTGGC GAAATCGTCT CACTTTGTGG GGAAAATGGG
TCTGGTAAAT CAACGCTGAT GAAAGTGCTG TGTGGTATTT ATCCCCATGG CTCCTACGAA
GGCGAAATTA TTTTTGCGGG AGAAGAGATT CAGGCGAGTC ACATCCGCGA TACCGAACGC
AAAGGTATCG CCATCATTCA TCAGGAATTG GCCCTGGTGA AAGAATTGAC CGTGCTGGAA
AATATCTTCC TGGGTAACGA AATAACCCAC AATGGCATTA TGGATTATGA CCTGATGACG
CTACGCTGTC AGAAGCTGCT CGCACAGGTC AGTTTATCCA TTTCACCTGA TACCCGCGTT
GGCGATTTAG GGCTTGGGCA ACAACAACTG GTTGAAATTG CCAAGGCACT TAATAAACAG
GTGCGCTTGT TAATTCTCGA TGAACCGACA GCCTCATTAA CTGAGCAGGA AACGTCGGTT
TTACTGGATA TTATTCGCGA TCTACAACAG CACGGTATCG CCTGTATTTA TATTTCGCAC
AAACTCAACG AAGTCAAAGC GATTTCCGAT ACGATTTGCG TTATTCGCGA CGGACAGCAC
ATTGGTACGC GTGATGCTGC CGGAATGAGT GAAGACGATA TTATCACCAT GATGGTCGGG
CGAGAGTTAA CCGCGCTTTA CCCTAATGAA CCACATACCA CCGGAGATGA AATATTACGT
ATTGAACATC TGACGGCATG GCATCCGGTC AATCGTCATA TTAAACGAGT TAATGATGTC
TCGTTTTCCC TGAAACGTGG CGAAATACTG GGTATTGCCG GACTCGTTGG TGCCGGACGT
ACCGAGACCA TTCAGTGCCT GTTTGGCGTG TGGCCCGGAC AATGGGAAGG AAAAATTTAT
ATTGATGGCA AACAGGTAGA TATTCGTAAC TGTCAGCAAG CCATCGCCCA GGGGATTGCG
ATGGTACCCG AAGACAGAAA GCGCGACGGC ATCGTTCCGG TAATGGCGGT TGGTAAAAAT
ATTACCCTCG CCGCACTCAA TAAATTTACC GGTGGCATTA GCCAGCTTGA TGACGCGGCA
GAGCAAAAAT GTATTCTGGA ATCAATCCAG CAACTCAAAG TTAAAACGTC GTCCCCCGAC
CTTGCTATTG GACGTTTGAG CGGCGGCAAT CAGCAAAAAG CGATCCTCGC TCGCTGTCTG
TTACTTAACC CGCGCATTCT CATTCTTGAT GAACCCACCA GGGGTATCGA TATTGGCGCG
AAATACGAGA TCTACAAATT AATTAACCAA CTCGTCCAGC AGGGTATTGC CGTTATTGTC
ATCTCTTCCG AATTACCTGA AGTGCTCGGC CTTAGCGATC GTGTACTGGT GATGCATGAA
GGGAAACTAA AAGCCAACCT GATAAATCAT AACCTGACTC AGGAGCAGGT GATGGAAGCC
GCATTGAGGA GCGAACATCA TGTCGAAAAG CAATCCGTCT GA
|
|---|
| Protein sequence | MPYLLEMKNI TKTFGSVKAI DNVCLRLNAG EIVSLCGENG SGKSTLMKVL CGIYPHGSYE
GEIIFAGEEI QASHIRDTER KGIAIIHQEL ALVKELTVLE NIFLGNEITH NGIMDYDLMT
LRCQKLLAQV SLSISPDTRV GDLGLGQQQL VEIAKALNKQ VRLLILDEPT ASLTEQETSV
LLDIIRDLQQ HGIACIYISH KLNEVKAISD TICVIRDGQH IGTRDAAGMS EDDIITMMVG
RELTALYPNE PHTTGDEILR IEHLTAWHPV NRHIKRVNDV SFSLKRGEIL GIAGLVGAGR
TETIQCLFGV WPGQWEGKIY IDGKQVDIRN CQQAIAQGIA MVPEDRKRDG IVPVMAVGKN
ITLAALNKFT GGISQLDDAA EQKCILESIQ QLKVKTSSPD LAIGRLSGGN QQKAILARCL
LLNPRILILD EPTRGIDIGA KYEIYKLINQ LVQQGIAVIV ISSELPEVLG LSDRVLVMHE
GKLKANLINH NLTQEQVMEA ALRSEHHVEK QSV
|
|---|
| |