| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0118 |
|---|
| Symbol | |
|---|
| ID | 6064646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 126660 |
|---|
| End bp | 127598 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641599520 |
|---|
| Product | RHS protein |
|---|
| Protein accession | YP_001723129 |
|---|
| Protein GI | 170018175 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3209] Rhs family protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.604872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACC GGCTGGAAAG TGAAATCCTG GCTGACCGGG TGAGTGAGGA AAGCCGCCGC
TGGCTGGCAT CGTGCGGCCT GACCGTGGAG CAGATGAAAA ACCAGATGGA CCCGGTGTAC
ACGCCGGCGC GAAAAATCCA CCTGTACCAC TGCGACCATC GCGGCCTGCC GCTGGCGCTC
ATCAGCACGG AAGGGGCAAC AGCGTGGTGC GCAGAATATG ATGAATGGGG CAACCTGCTG
AGTGATGAGA ACCCGCATCA TCTGCAGCAG CTCATTCGCC TGCCGGGTCA GCAGTATGAT
GAGGAGTCCG GCCTGTATTA CAACCGCCAC CGCTATTATG ACCCGCTGCT GGGGCGGTAT
ATCACTCAGG ATCCGATTGG ACTGAAGGGG GGATGGAATT TTTATCAGTA TCCGTTGAAT
CCGGTCATAA ATGTAGATCC GCAAGGTTTG GTTGATATAA ATTTATACCC CGAAAGTGAT
CTTATCCATT CTGTAGCTGA TGAGATTAAT ATCCCAGGCG TTTTCACAAT CGGGGGGCAT
GGTACCCCCA CATCTATTGA ATCCGCAACG CGCAGTATCA TGACAGCTAA AGATCTAGCA
TATCTAATTA AATTTGATGG GAATTATAAA GATGGGATGA CAGTTTGGTT ATTTTCTTGT
AATACAGGTA AAGGACAAAA TTCATTTGCT AGCCAATTAG CTAAAGAGTT ACATACAAAT
GTAATAGGAC CTGACACGCT ATGGACGTGG TGGGGGCGAG GAACTAATGG TAAGTTAAAA
ATGGATACAG TGCTAACAGC ACCAACGAAC CTTAATTCAA ATAAGGATCT AATGGCTATA
ACAACAAAAG ACCTTGGTAA TTGGATAACA TATGGGCCAT CTGGGCACCC CATTTCTAAT
ATGCAAGGTA CGCCAGAAAA ACCCAGTGAT ATAAGATAG
|
|---|
| Protein sequence | MLDRLESEIL ADRVSEESRR WLASCGLTVE QMKNQMDPVY TPARKIHLYH CDHRGLPLAL
ISTEGATAWC AEYDEWGNLL SDENPHHLQQ LIRLPGQQYD EESGLYYNRH RYYDPLLGRY
ITQDPIGLKG GWNFYQYPLN PVINVDPQGL VDINLYPESD LIHSVADEIN IPGVFTIGGH
GTPTSIESAT RSIMTAKDLA YLIKFDGNYK DGMTVWLFSC NTGKGQNSFA SQLAKELHTN
VIGPDTLWTW WGRGTNGKLK MDTVLTAPTN LNSNKDLMAI TTKDLGNWIT YGPSGHPISN
MQGTPEKPSD IR
|
|---|
| |