| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0115 |
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| Symbol | |
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| ID | 6065097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 123447 |
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| End bp | 124583 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641599517 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001723126 |
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| Protein GI | 170018172 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0435233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTAT TGATTGTTTT AACTTACGTG GCGCTGGCGT GGGCGGTCTT TAAAATCTTC
CGCATTCCGG TAAATCAGTG GACGCTGGCG ACGGCGGCGC TGGGAGGCGT GTTTCTGGTG
AGTGGTTTGA TTTTGTTGAT GAACTACAAC CACCCTTACA CTTTTACCGC GCAAAAGGCA
GTGATAGCGA TCCCTATCAC GCCACAGGTG ACGGGAATTG TTACTGAAGT CACTGACAAG
AATAATCAGC TTATTCAAAA GGGCGAGGTG CTTTTTAAGC TCGACCCGGT TCGTTACCAG
GCGCGAGTTG ACAGACTTCA GGCTGACCTG ATGACGGCGA CGCATAATAT AAAGACGCTG
CGTGCGCAGC TCACTGAAGC GCAGGCCAAC ACCACCCAGG TTTCAGCGGA GCGCGACCGT
CTGTTTAAAA ATTATCAACG TTACTTGAAT GGCAGCCAGG CGGCGGTGAA TCCGTTCTCG
GAACGTGACA TCGACGATGC GCGGCAAAAT TTCCTCGCGC AGGATGCGCT GGTGAAAGGC
TCGGTGGCGG AGCAGGCGCA GATCCAGAGC CAGCTCGACA GTATGGTTAA CGGCGAGCAA
TCGCAGATTG TGAGCTTAAG AGCGCAACTT ACTGAAGCAA AATATAACCT TGAGCAGACT
GTCATTCGCG CGCCGAGCAA TGGCTACGTT ACTCAGGTAC TGATCCGCCC AGGTACATAC
GCAGCTGCCT TGCCGCTGCG TCCGGTGATG GTCTTCATCC CCGAGCAAAA ACGGCAAATT
GTCGCCCAAT TTCGGCAAAA CTCGCTGTTA CGTCTGAAAC CCGGCGATGA TGCGGAAGTG
GTGTTTAACG CGCTACCTGG GCAGGTGTTT CACGGCAAAC TGACTAGTAT TTTACCTGTC
GTGCCAGGCG GTTCTTATCA GGCGCAGGGG GTATTGCAAT CATTAACGGT CGTGCCCGGC
ACGGACGGTG TGCTGGGAAC CATTGAACTG GACCCTAACG ATGATATCGA TGCCTTACCC
GACGGCATCT ACGCCCAGGT GGCGGTTTAC TCCGACCATT TCAGCCATGT TTCGGTGATG
CGGAAAGTGC TGCTAAGAAT GACCAGCTGG ATGCATTATC TTTATTTGGA TCATTGA
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| Protein sequence | MDLLIVLTYV ALAWAVFKIF RIPVNQWTLA TAALGGVFLV SGLILLMNYN HPYTFTAQKA
VIAIPITPQV TGIVTEVTDK NNQLIQKGEV LFKLDPVRYQ ARVDRLQADL MTATHNIKTL
RAQLTEAQAN TTQVSAERDR LFKNYQRYLN GSQAAVNPFS ERDIDDARQN FLAQDALVKG
SVAEQAQIQS QLDSMVNGEQ SQIVSLRAQL TEAKYNLEQT VIRAPSNGYV TQVLIRPGTY
AAALPLRPVM VFIPEQKRQI VAQFRQNSLL RLKPGDDAEV VFNALPGQVF HGKLTSILPV
VPGGSYQAQG VLQSLTVVPG TDGVLGTIEL DPNDDIDALP DGIYAQVAVY SDHFSHVSVM
RKVLLRMTSW MHYLYLDH
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