Gene EcolC_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0024 
Symbol 
ID6068484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp25060 
End bp25407 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content52% 
IMG OID641599428 
Productisocitrate dehydrogenase (NADP(+)) 
Protein accessionYP_001723038 
Protein GI170018084 
COG category[S] Function unknown 
COG ID[COG2149] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTT CCCGCCTTGG AGAAGCGCCC GATTACCGCT TCTCGCTGGC TAATGAGCGT 
ACTTTTCTGG CGTGGATCCG TACCGCACTA GGATTTCTGG CGGCGGGGGT TGGGCTTGAT
CAACTTGCGC CAGATTTCGC CACGCCCGTC ATTCGTGAAC TGCTGGCGTT GTTGTTGTGT
CTGTTTTCCG GCGGGTTAGC AATGTATGGC TACCTGCGCT GGTTACGCAA TGAAAAAGCG
ATGCGTCTGA AAGAGGACCT GCCCTACACC AACAGCTTAT TAATCATTAG CTTAATATTG
ATGGTCGTGG CGGTGATCGT TATGGGACTG GTGTTGTATG CCGGATAG
 
Protein sequence
MNISRLGEAP DYRFSLANER TFLAWIRTAL GFLAAGVGLD QLAPDFATPV IRELLALLLC 
LFSGGLAMYG YLRWLRNEKA MRLKEDLPYT NSLLIISLIL MVVAVIVMGL VLYAG