Gene EcolC_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0019 
Symbol 
ID6068544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp19162 
End bp19878 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content51% 
IMG OID641599424 
ProductGntR family transcriptional regulator 
Protein accessionYP_001723034 
Protein GI170018080 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTACA AAAGCATTGC GGAGCGGTTA AGAATTCGAC TTAACTCCGC AGATTTCACG 
CTAAACAGCC TTCTTCCCGG TGAAAAAAAG CTGGCGGAAG AGTTTGCGGT ATCGCGGATG
ACCATCCGTA AAGCCATTGA CCTGCTGGTA GCGTGGGGGC TGGTGGTCCG CCGCCACGGT
AGTGGCACTT ACCTGGTGCG CAAAGATGTA CTGCATCAAA CCGCCAGTCT GACCGGGCTG
GTGGAGGTGT TAAAACGGCA GGGAAAAACG GTCACCAGCC AGGTGCTGAT TTTTGAAATC
ATGCCTGCGC CTCCGGCCAT TGCCAGCCAG TTACGGATTC AAATCAACGA GCAGATCTAC
TTCTCCCGTC GCGTTCGTTT TGTGGAAGGG AAACCGCTGA TGCTGGAAGA CAGCTATATG
CCGGTAAAAC TGTTCCGTAA TCTTTCGCTG CAACATCTGG AAGGGTCGAA GTTTGAATAT
ATTGAACAAG AGTGCGGGAT TTTGATTGGC GGTAATTATG AAAGCCTGAC GCCAGTGCTC
GCCGATAGAC TGCTGGCGCG GCAAATGAAG GTAGCGGAAC ACACGCCACT GCTGCGGATC
ACCTCGTTGT CATATAGCGA GAGCGGGGAG TTTTTGAATT ATTCAGTGAT GTTCAGAAAT
GCCAGCGAAT ACCAGGTGGA GTACCATTTA CGGCGACTCC ACCCGGAAAA GAGTTAA
 
Protein sequence
MIYKSIAERL RIRLNSADFT LNSLLPGEKK LAEEFAVSRM TIRKAIDLLV AWGLVVRRHG 
SGTYLVRKDV LHQTASLTGL VEVLKRQGKT VTSQVLIFEI MPAPPAIASQ LRIQINEQIY
FSRRVRFVEG KPLMLEDSYM PVKLFRNLSL QHLEGSKFEY IEQECGILIG GNYESLTPVL
ADRLLARQMK VAEHTPLLRI TSLSYSESGE FLNYSVMFRN ASEYQVEYHL RRLHPEKS