Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0012 |
Symbol | |
ID | 6068536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 12047 |
End bp | 13339 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641599417 |
Product | d-galactonate transporter |
Protein accession | YP_001723027 |
Protein GI | 170018073 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC CCGTTAATGC AGCAAAGCCG GGGCGTCGGC GTTATCTGAC GCTGGTGATG ATCTTTATTA CGGTAGTCAT TTGTTATGTC GACCGCGCCA ACCTGGCCGT GGCTTCCGCC CATATTCAGG AAGAGTTCGG CATTACCAAA GCGGAAATGG GCTATGTATT TTCGGCCTTC GCCTGGCTTT ATACGCTATG TCAGATCCCC GGCGGTTGGT TTTTAGATCG CGTAGGTTCT CGCGTGACTT ATTTTATTGC GATATTTGGC TGGTCAGTGG CGACTTTATT CCAGGGCTTT GCCACGGGCT TAATGTCATT AATTGGTCTG CGCGCGATAA CCGGTATTTT CGAAGCGCCT GCTTTCCCGA CCAATAACCG GATGGTGACC AGCTGGTTCC CGGAACATGA ACGCGCTTCT GCCGTTGGTT TTTATACGTC TGGTCAGTTT GTCGGTCTGG CGTTTCTGAC GCCGCTGCTG ATCTGGATCC AGGAGCTGTT GAGCTGGCAC TGGGTGTTCA TTGTCACCGG TGGTATCGGC ATTATCTGGT CGCTGATTTG GTTTAAGGTT TATCAGCCGC CGCGCCTGAC CAAAGGCATC AGCAAAGCTG AACTGGATTA CATTCGTGAT GGCGGCGGTC TGGTGGATGG CGATGCACCG GTGAAGAAAG AGGCGCGTCA GCCGTTAACA GCCAAAGACT GGAAACTGGT GTTCCATCGT AAACTGATCG GCGTCTATCT TGGGCAATTT GCGGTGGCTT CTACACTGTG GTTTTTCTTA ACCTGGTTCC CGAACTATTT AACCCAGGAA AAAGGGATCA CGGCGCTGAA AGCGGGCTTT ATGACCACGG TACCGTTCCT CGCGGCGTTT GTCGGCGTCC TGCTCTCTGG CTGGGTCGCG GATCTGCTGG TACGTAAGGG CTTTTCACTG GGCTTTGCGC GTAAAACGCC GATTATCTGC GGCTTGCTGA TCTCCACCTG CATTATGGGT GCTAACTACA CTAACGATCC GATGATGATT ATGTGCCTGA TGGCGCTGGC ATTCTTCGGC AACGGTTTTG CTTCGATTAC CTGGTCGCTG GTCTCTTCTC TGGCACCGAT GCGCCTGATT GGTTTAACCG GCGGCGTGTT TAACTTCGCC GATGGTCTGG GCGGCATCAC CGTTCCGCTG GTGGTGGGGT ACCTGGCGCA GGGTTACGGT TTCGCACCTG CACTGGTTTA TATCTCCGCC GTCGCGTTGA TTGGCGCGCT CTCTTACATC CTGCTGGTGG GCGATGTGAA GCGCGTTGGC TAA
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Protein sequence | MDIPVNAAKP GRRRYLTLVM IFITVVICYV DRANLAVASA HIQEEFGITK AEMGYVFSAF AWLYTLCQIP GGWFLDRVGS RVTYFIAIFG WSVATLFQGF ATGLMSLIGL RAITGIFEAP AFPTNNRMVT SWFPEHERAS AVGFYTSGQF VGLAFLTPLL IWIQELLSWH WVFIVTGGIG IIWSLIWFKV YQPPRLTKGI SKAELDYIRD GGGLVDGDAP VKKEARQPLT AKDWKLVFHR KLIGVYLGQF AVASTLWFFL TWFPNYLTQE KGITALKAGF MTTVPFLAAF VGVLLSGWVA DLLVRKGFSL GFARKTPIIC GLLISTCIMG ANYTNDPMMI MCLMALAFFG NGFASITWSL VSSLAPMRLI GLTGGVFNFA DGLGGITVPL VVGYLAQGYG FAPALVYISA VALIGALSYI LLVGDVKRVG
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