| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4246 |
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| Symbol | |
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| ID | 6088430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4686344 |
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| End bp | 4687984 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641599345 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_001722955 |
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| Protein GI | 170026450 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000142375 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCGC AACGCAATCT TCTACTCATC GCTCTGCTGT TCGTGTCTTT CATGATCTGG
CAAGCTTGGC AAGTGGATAA CAATCCACAA CCAACCGCTC AGACCACGCA ACAGACTACG
AATACCGCTA CCGGTGATAA AGCAAGCCAG GCTGTGCCAG GCAGCGGTCA GGGTCAACTG
ATCACTGTAA AAACTGATGT GCTGTCTCTG ACTATTAATA CCCGTGGCGG TGACATTGAG
CAGGCTAACC TGCTGGCTTA CCCAGATACT TTGGGTTCAA GTAATACGTT CGAATTACTG
GAAACCACTC CAAGTTTCGT TTATCAGGCA CAAAGTGGTC TGACAGGAAA AAATGGCCCG
GATAACCCAG CGAATGGCGA CCGTCCTTTG TTTGAAGTGC CACAAACCAG CTTTGTTCTG
GCAGATGGTC AGGATGAACT GCGCATTCCA TTGACCTTCA CAAGTAAAGA TGGCTCTGTT
TTCATTAAGA CTTTCGTGCT GAAACGTAAC GATTACGCCA TTGGCGTGGA TTATCACGTT
AACAACGCCT CCGCTGCCCC ACTGGAGCTG ACGCTGTTTG GTCAATTGAA ACAAAGCATC
AACTTGCCTA AAAAGCGTGA TACCGGTAGC AATAACTTTG CGCTACAGAC TTATCGTGGT
GCGGCTTACT CTTCTGATGA AACTAAATAT AAGAAATATA GCTTTAGTGA CATCGAAGAC
AAAAATCTGG ACATCACCAC CAAAGGTGGT TGGGTCGCTA TGTTGCAGCA GTATTTCGCC
ACAGCATGGA TCCCAGCGGC TAACGAAACC AACACCTTCT ACTCTGCTGA GTTAGGTAAC
GGCCTGGCCG CAATTGGTTT CAAAGGTGCA CCTGTTGTTA TCCAACCCGG TGAACAGAAA
CAACTGAGTG CCACACTGTG GGTGGGCCCA GAGATTCAGA ATAAAATGGC GGAAATTGCG
CCACATCTGG ACCTGACTGT TGATTATGGT TGGTTGTGGT TCATTTCTCA GCCACTGTTC
AAACTGCTGA AGTTTATCCA CAGCTTTGTG GGGAACTGGG GCTTCTCCAT CATCGTTATT
ACCTTTATCG TGCGCGGTAT CATGTACCCG CTGACAAAAG CGCAATACAC CTCGATGGCG
AAAATGCGTT TGCTGCAGCC TAAACTGGCC GCCATGCGTG AGCGTATCGG TGACGATAAG
CAGCGTATGA GTCAGGAGAT GATGGCGCTG TACAAAGCGG AGAAGGTTAA CCCGCTGGGT
GGCTGCTTAC CGCTGATCAT TCAGATGCCA ATCTTCTTGG CGTTGTACTA CATGTTGATG
AGTTCTGTTG AGTTGCGCCA TGCGCCATTC ATTCTGTGGA TTCATGACCT GTCAGCACAA
GACCCGTACT ACATTCTGCC AATTCTGATG GGTATCACCA TGTACTTCAT TCAGAAGATG
TCACCAACCA CCGTGACTGA CCCAATGCAG CAGAAGATCA TGACCTTTAT GCCGGTTATC
TTCACGGTAT TCTTCCTGTG GTTCCCGGCA GGTCTGGTGC TGTACTATAT CGTCAGCAAC
CTGGTGACCA TCCTGCAACA ACAGCTGATT TATCGTGGTC TGGAAAAACG TGGCTTACAC
AGCCGCGAGA AGAAAAAATA A
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| Protein sequence | MDSQRNLLLI ALLFVSFMIW QAWQVDNNPQ PTAQTTQQTT NTATGDKASQ AVPGSGQGQL
ITVKTDVLSL TINTRGGDIE QANLLAYPDT LGSSNTFELL ETTPSFVYQA QSGLTGKNGP
DNPANGDRPL FEVPQTSFVL ADGQDELRIP LTFTSKDGSV FIKTFVLKRN DYAIGVDYHV
NNASAAPLEL TLFGQLKQSI NLPKKRDTGS NNFALQTYRG AAYSSDETKY KKYSFSDIED
KNLDITTKGG WVAMLQQYFA TAWIPAANET NTFYSAELGN GLAAIGFKGA PVVIQPGEQK
QLSATLWVGP EIQNKMAEIA PHLDLTVDYG WLWFISQPLF KLLKFIHSFV GNWGFSIIVI
TFIVRGIMYP LTKAQYTSMA KMRLLQPKLA AMRERIGDDK QRMSQEMMAL YKAEKVNPLG
GCLPLIIQMP IFLALYYMLM SSVELRHAPF ILWIHDLSAQ DPYYILPILM GITMYFIQKM
SPTTVTDPMQ QKIMTFMPVI FTVFFLWFPA GLVLYYIVSN LVTILQQQLI YRGLEKRGLH
SREKKK
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