Gene YPK_4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4220 
Symbol 
ID6088968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4659293 
End bp4660117 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content46% 
IMG OID641599319 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001722929 
Protein GI170026424 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000114872 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCAT CAGGAGAAAT CTCTACTCCA AGGGACTACA TAGGTCACCA CCTGAATCAC 
CTTCAGTTGG ACCTGCGTAC CTTTGAGTTG GTCAATCCCC ACTCAACTGG CCCTGCAACG
TTCTGGACGT TGAACATTGA CTCTTTGTTC TTCTCTGTCG TGCTGGGGTT AGCTTTTCTG
CTTGTGTTCC GCAAAGTTGC TGCAAGCGCC ACCAGTGGCG TACCCGGTAA ATTGCAGACT
GCTGTAGAGT TAATTATCGG TTTTGTCGAT AACAGTGTGC GGGATATGTA TCACGGCAAA
AGTAAAGTCA TCGCACCATT AGCCCTAACA GTCTTTGTTT GGGTTTTATT GATGAACATG
ATGGATTTAC TGCCAATCGA TTTACTGCCT TACATCGGTG AACATGTCTT TGGGTTACCA
GCACTGCGTG TGGTACCTAC AGCTGACGTG AGCATTACGT TGTCTATGGC ATTGGGTGTT
TTCATCCTGA TTATTTTCTA TAGCATTAAA ATGAAAGGTG TAGGCGGCTT CACAAAAGAA
TTAACTATGC AGCCGTTCAA TCACCCGATA TTCATTCCAG TAAACTTAAT TCTGGAAGGT
GTCAGCCTGC TGTCCAAACC GCTTTCATTG GGTCTGCGAC TGTTCGGCAA CATGTATGCG
GGTGAGTTGA TCTTCATCCT GATTGCGGGT CTGTTGCCGT GGTGGTCACA GTGGATGCTC
AGTGTTCCTT GGGCTATATT CCACATCCTG ATCATTACGT TACAAGCCTT TATCTTCATG
GTTCTGACGA TTGTCTATCT CTCGATGGCA TCCGAAGAGC ACTGA
 
Protein sequence
MSASGEISTP RDYIGHHLNH LQLDLRTFEL VNPHSTGPAT FWTLNIDSLF FSVVLGLAFL 
LVFRKVAASA TSGVPGKLQT AVELIIGFVD NSVRDMYHGK SKVIAPLALT VFVWVLLMNM
MDLLPIDLLP YIGEHVFGLP ALRVVPTADV SITLSMALGV FILIIFYSIK MKGVGGFTKE
LTMQPFNHPI FIPVNLILEG VSLLSKPLSL GLRLFGNMYA GELIFILIAG LLPWWSQWML
SVPWAIFHIL IITLQAFIFM VLTIVYLSMA SEEH