Gene YPK_4218 details

Gene Information

• Locus tag: YPK_4218
• Symbol: gidB
• ID: 6089217
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 4657567
• End bp: 4658187
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641599317
• Product: 16S rRNA methyltransferase GidB
• Protein accession: YP_001722927
• Protein GI: 170026422
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division
• TIGRFAM ID: [TIGR00138] 16S rRNA methyltransferase GidB

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00057334
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTAAAAA AATTAGACTC TCTGCTTACC GTTGCTGGTA TTACGTTACC CGATCAGCAA 
AAACATCAGT TGATTGGCTA TGTAGAGCTG CTAGACAAGT GGAATAAAGC TTATAACCTG 
ACATCTGTTC GTGATCCACA GCAAATGTTA GTGCGTCATA TCCTTGATAG CATTGTGGTT 
AATCCCCATC TGCAAGGCAG CCGATTTATT GATGTCGGAA CCGGGCCAGG TCTTCCTGGT 
ATCCCTTTGG CTATTGTGCG CCCTGATGCA CATTTTACTT TGTTGGATAG CCTGGGTAAG 
CGGGTTCGCT TTCTACGTCA GGTGCAACAC GAACTGGGGT TAAATAACAT TGAGCTGGTT 
CAGAGCAGAG TTGAGGCATT TACCTCAGAA CCGCCATTTG ATGGTGTGAT AAGCCGTGCA 
TTTGCATCCT TACAAGATAT GCTCTCGTGG TGTCACCACT TGCCAGCTAA GCCTGAAGGG 
CGTTTTTATG CGCTTAAAGG GGTTCGGCCT GATGATGAGT TAGCGGTTCT GCCCGAAGAT 
ATTGTTCTTG AGTCGGTGAT AAAACTGGAT GTTCCCGAAT TGGATGGAGA GCGGCATTTG 
ATTATTCTTA AGTCAAACTA A 

 

Protein sequence

MLKKLDSLLT VAGITLPDQQ KHQLIGYVEL LDKWNKAYNL TSVRDPQQML VRHILDSIVV 
NPHLQGSRFI DVGTGPGLPG IPLAIVRPDA HFTLLDSLGK RVRFLRQVQH ELGLNNIELV 
QSRVEAFTSE PPFDGVISRA FASLQDMLSW CHHLPAKPEG RFYALKGVRP DDELAVLPED 
IVLESVIKLD VPELDGERHL IILKSN