| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4215 |
|---|
| Symbol | |
|---|
| ID | 6088414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 4654158 |
|---|
| End bp | 4654619 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641599314 |
|---|
| Product | DNA-binding transcriptional regulator AsnC |
|---|
| Protein accession | YP_001722924 |
|---|
| Protein GI | 170026419 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000923304 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA TTTATCAGAT CGATAATCTC GATCGCAGCA TCCTGAAAGC ATTAATGGAA
AATGCACGCA CACCCTATGC TGAATTAGCC AAAAACCTCG CTGTTAGCCC CGGAACTATT
CATGTAAGAG TAGAAAAGAT GCGGCAAGCA GGGATCATTA CCGCAGCTTG TGTACACGTT
AACCCAAAAC AACTGGGTTA CGACGTTTGC TGCTTTATTG GCATAATATT GAAAAGTGCC
AAAGATTACC CTTCAGCCCT GAAAAAATTG GAAAGCTTAG AAGAAGTGGT TGAGGCCTAT
TACACCACTG GTCACTACAG CATATTTATT AAAGTGATGT GTAAATCCAT TGATGCATTG
CAGCAGGTAC TTATCAACAA AATCCAGACT ATTGATGAGA TCCAGTCAAC CGAGACACTA
ATATCACTGC AAAACCCTAT CATGCGTACG ATCGTTCCTT AA
|
|---|
| Protein sequence | MSEIYQIDNL DRSILKALME NARTPYAELA KNLAVSPGTI HVRVEKMRQA GIITAACVHV
NPKQLGYDVC CFIGIILKSA KDYPSALKKL ESLEEVVEAY YTTGHYSIFI KVMCKSIDAL
QQVLINKIQT IDEIQSTETL ISLQNPIMRT IVP
|
|---|
| |