Gene YPK_4206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4206 
Symbol 
ID6088330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp4643733 
End bp4644422 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content44% 
IMG OID641599305 
ProductGntR domain-containing protein 
Protein accessionYP_001722915 
Protein GI170026410 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0000000481189 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTAA ATACCCAACA GCAAGCCGCC CAGCGAAATC TTTCCTACTT ACTGGCTGAA 
AAGATTGGTC AGCGTATTCT CGCAGGAGAA TATGAAGCGG GCAGTATACT GCCCGGCGAA 
ATAGAGTTGG GTGAACAATT TGGTGTAAGT CGCACCGCAG TACGTGAAGC AGTAAAAATG 
CTGGCAGCGA AGGGGATGCT ATTACCGCGC CCGCGTATTG GCACTCGTGT TATGCCACAG 
ACGAATTGGA ACTACCTTGA TCAGGAATTA TTAACGTGGT GGATGACCAA GGAGAATTTT 
GATCAGGTCA TGCAACACTT CCTTATACTA AGAACATCGT TGGAACCACA AGCCTGTTAT 
CTGGCTGCCA CACACGCCAA TGAGAAACAG CGAGAGCTGT TAGCATCACT AGTTGCAGAA 
ATGCGTGCAC TGCATAGCAA CTTTAATCGT GAGCAATGGA TTCAGGTGGA TACCCAGTTT 
CATAAATTAA TTTATGAAGC CAGCGGCAAT CCATTTTTAA TCTCTTTTGC TAACTTATTC 
AGTTCGGTTT ATTACAGCTA CTTTCGTGCT ATTACTGGTG ATGAAGTGAT TAAGCTACAA 
CATCATCAGA ACATTGTAGA TACGATTCTG GCAGGTGATA ATCAAGGTGC TTTATTCGCC 
TGTCAGGTGC TATTAAAAAC GGTAGACTGA
 
Protein sequence
MQLNTQQQAA QRNLSYLLAE KIGQRILAGE YEAGSILPGE IELGEQFGVS RTAVREAVKM 
LAAKGMLLPR PRIGTRVMPQ TNWNYLDQEL LTWWMTKENF DQVMQHFLIL RTSLEPQACY 
LAATHANEKQ RELLASLVAE MRALHSNFNR EQWIQVDTQF HKLIYEASGN PFLISFANLF 
SSVYYSYFRA ITGDEVIKLQ HHQNIVDTIL AGDNQGALFA CQVLLKTVD