| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4195 |
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| Symbol | |
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| ID | 6089111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4629710 |
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| End bp | 4632508 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641599294 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001722907 |
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| Protein GI | 170026402 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00580719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGA TTGCAGAAAA CCCATTGATC CTTGTTGACG GTTCCTCTTA CCTCTACCGT
GCTTACCATG CTTTCCCACC ACTGACTAAT GGTAGCGGGG AGCCAACCGG TGCGATGTAT
GGCGTTCTGA ACATGCTACG CAGTCTGCTG CTGCAATATC GACCAAGTCA TGTTGCAGTA
GTTTTTGATG CAAAAGGTAA AACGTTCCGT GATGAACTTT TTGCTGAATA TAAATCCCAC
CGACCGCCAA TGCCGGATGA TTTACGGGTG CAAATTGAAC CTCTTCATCA GATGGTTAAA
GCGATGGGAT TGCCTTTATT GGTCGTTTCT GGCGTCGAAG CTGATGATGT TATTGGCACC
CTAGCTCGGG AAGCCGAAAA AGCAGGCCAT TCGGTATTAA TCAGTACTGG TGATAAAGAC
ATGGCGCAAT TAGTTACGCC GAATATCACT TTGATCAATA CCATGAATAA CACTATTTTA
GGGCCGCAGG ATGTTTGCGA TAAATATGGT GTCCCTCCCG AACTGATCAT TGATTTTCTC
GCTCTGATGG GTGACTCCTC CGATAATATT CCGGGAGTAC CTGGTGTTGG CGAAAAAACA
GCACAGGCTT TATTGCAAGG TTTGGGTGGG TTGGATACGT TATTCAGTAA TCTGGATAAA
ATATCAACCT TGACGTTCCG TGGTGCGAAA ACAATGTCGG CCAAGCTAGA GCAAAATAAA
GACGTTGCTT ATCTCTCCTA TAAATTGGCT ACTATCAAGA CAGACGTTGA GTTAGATGTA
ACCTGTGATG AGCTAACCGT TTCTCCTCCC GATGATAAAC AGTTACATCA GTTATTCAGT
CGTTATGAAT TTAAGCGTTG GCTGGCTGAT GTCGAAGCCG GCAAATGGTT GGACAGTAAA
AAAGATCGGC CAACAGGGCA AACAAGCAGT CAATCTTTTG TTGCCGCAGA TACGGCCCCT
ACTGCTGAAG TCACCGCAGT GCTTTCACAA GAGAATTACC AGACTATTTT AGATGAGAAA
GCATTGGCTG ATTGGATTGA GCGCCTTAAA GCCGCTGAAG TTTTTGCTTT TGATACTGAA
ACTGATGGCC TTGATACCCT TAGCTGTAAC TTAATTGGGA TGTCTTTTGC TGTCGCTCCA
GGTGAAGCGG CTTATCTGCC TCTGGCTCAT GATTACCTGG ATGCCCCGCC CCAACTTGAC
CGTGACTGGG TTCTGGCGAC CCTGAAACCA CTTCTGGAAG ACGATAAGGC GCTTAAAGTT
GGGCAGAACC TCAAGTTCGA TAAAAGTATG CTGGCTCGTT ATGGTATCGA TCTAAAAGGT
ATTGCTTTCG ATACCATGCT GGAGTCTTAT GTTTTGGATA GTGTTGCGGG CCGTCATGAT
ATGGACAGCT TGGCGGAGCG CTACCTCAAT CATAAAACGA TTACGTTTGA AGAGATTGCC
GGTAAAGGTA AAAATCAGCT AACGTTTAAT CAGATTGCGT TGGAGCAAGC TGGCCCGTAT
GCCGCAGAGG ATGCCGATGT TACCCTTCAA TTACATTTGG TCTTATGGCC AAAATTACAG
CAAAGTGAAG GCCTCAAGCG GGTATTCCAA GAAATTGAGA TGCCGTTATT GCCGATCTTG
TCTCGTATTG AGCGAACTGG CGTATTGATT GACCAAAATA TATTAGCGGC ACACTCAAAA
GAGCTCACCA TCCGTTTGGA TGAGCTGGAA AAGCAGGCCC ATGAATTGGC TGAAGAGCCA
TTCAACCTGG CATCACCTAA ACAGCTACAG GCTATTCTTT ATGAAAAGCA AAAATTGCCT
ATCTTGAAGA AAACACCTGG AGGCGCGGCG TCAACGAATG AGGAAGTGCT GGCTGAGTTG
GCTCTGGATT ATCCTTTGCC GAAGGTGATT CTGGAATATC GTGGTCTGGC GAAACTAAAA
AGCACTTACA CCGACAAATT GCCGCTAATG ATTAACCCCG TCTCCGGTCG GGTACACACT
TCCTATCATC AGGCAGTGAC AGCAACCGGG CGCTTGTCTT CCCGCGATCC TAACCTACAA
AATATCCCTG TACGTAATGA AGAGGGGCGA CGTATTCGTC AGGCCTTTAT TGCACCGAAG
GGCTACTGCA TTATGGCGGC CGACTACTCG CAAATTGAAC TGCGTATTAT GGCGCATTTG
TCGCAGGATA ACGGGCTGTT AGCTGCATTT GCTGCTGGGC AGGATATCCA CCGGGCAACC
GCCGCGGAAG TATTTGGTTC GCCATTGGAA AAAGTGACGA CGGAGCAGCG TCGTAGCGCA
AAAGCGATTA ATTTTGGTTT GATTTATGGC ATGAGTGCTT TTGGCTTGGC ACGCCAGTTG
GGGATCCCTC GTGGAGAGGC TCAACGTTAT ATGGATCTCT ATTTTGAGCG TTATCCGGGG
GTGTTGGAGT ATATGGAGCG TACTCGTAAA CAGGCTGCTG AGCAGGGCTA TGTCACGACA
CTGGATGGTC GCCGCCTCTA TCTGCCGGAT ATTCACTCAC GGAATGCAAA CCGTCGAAAA
GCGGCTGAAC GTGAGGCGAT TAATGCCCCT ATGCAAGGTA CGGCTGCGGA TATTATCAAG
CGGGCGATGA TTGCGGTGGA TGGTTGGTTA CAGCAAGAGC CAGAACCGTT GGTGCGTGTC
ATCATGCAAG TACACGATGA ATTGGTCTTT GAAGTGCATG AAAGTGTTTT GCAAAGTGCT
GAGCAGAAAA TCCGTGAGTT GATGGAGCAA AGTATGCAAC TGGCTGTGCC ATTGAAGGTG
GATGTCGGTG TTGGCGCTAA CTGGGATCAA GCTCATTAG
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| Protein sequence | MAQIAENPLI LVDGSSYLYR AYHAFPPLTN GSGEPTGAMY GVLNMLRSLL LQYRPSHVAV
VFDAKGKTFR DELFAEYKSH RPPMPDDLRV QIEPLHQMVK AMGLPLLVVS GVEADDVIGT
LAREAEKAGH SVLISTGDKD MAQLVTPNIT LINTMNNTIL GPQDVCDKYG VPPELIIDFL
ALMGDSSDNI PGVPGVGEKT AQALLQGLGG LDTLFSNLDK ISTLTFRGAK TMSAKLEQNK
DVAYLSYKLA TIKTDVELDV TCDELTVSPP DDKQLHQLFS RYEFKRWLAD VEAGKWLDSK
KDRPTGQTSS QSFVAADTAP TAEVTAVLSQ ENYQTILDEK ALADWIERLK AAEVFAFDTE
TDGLDTLSCN LIGMSFAVAP GEAAYLPLAH DYLDAPPQLD RDWVLATLKP LLEDDKALKV
GQNLKFDKSM LARYGIDLKG IAFDTMLESY VLDSVAGRHD MDSLAERYLN HKTITFEEIA
GKGKNQLTFN QIALEQAGPY AAEDADVTLQ LHLVLWPKLQ QSEGLKRVFQ EIEMPLLPIL
SRIERTGVLI DQNILAAHSK ELTIRLDELE KQAHELAEEP FNLASPKQLQ AILYEKQKLP
ILKKTPGGAA STNEEVLAEL ALDYPLPKVI LEYRGLAKLK STYTDKLPLM INPVSGRVHT
SYHQAVTATG RLSSRDPNLQ NIPVRNEEGR RIRQAFIAPK GYCIMAADYS QIELRIMAHL
SQDNGLLAAF AAGQDIHRAT AAEVFGSPLE KVTTEQRRSA KAINFGLIYG MSAFGLARQL
GIPRGEAQRY MDLYFERYPG VLEYMERTRK QAAEQGYVTT LDGRRLYLPD IHSRNANRRK
AAEREAINAP MQGTAADIIK RAMIAVDGWL QQEPEPLVRV IMQVHDELVF EVHESVLQSA
EQKIRELMEQ SMQLAVPLKV DVGVGANWDQ AH
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