Gene YPK_4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4193 
Symbol 
ID6087608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp4627342 
End bp4627908 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content49% 
IMG OID641599292 
Producthypothetical protein 
Protein accessionYP_001722905 
Protein GI170026400 
COG category[S] Function unknown 
COG ID[COG3078] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.834401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGC CAAATAAAGC ACCACGCGCG AATATTGCGG CCCCGAAGGG TACAGCAACA 
CCAAAACGTA GAAGAAAGAC CCGTGATGAG CTGGATGCTG AAGCACGTGA CCGTAAACGT 
CAGAAGAAAC ACAGTGGCAA TCGCTCAGGT GCGAGAACCA ATGTTGAGGG CAGCAATAAG 
AAAGGGCATA GCCAGACTCA AGAGAAAGAT CCGCGTGTCG GCAGTAAAGT GCCTGTACCG 
CTGGTCATTG AGAGCCAGGT CAAAGCCAAG TCAATGCCTA AGCCTGTAGA GAACAATGTG 
GTTAAGCCAC GCCTGACGCC GGAAGAAGAG CTAGCCAAGC TGGAGAATGA CGAACGTCTG 
GATGCGCTGC TTGATCGTCT GGATAATGAC GAAGTATTGA ACAAAGAAGA CCAGGCCTAT 
GTCGATCTGA CATTAGACCG TATTGATGCC CTGATGGAGC AATTAGGCAT CGAACTGGGT 
GATGACGAAG ATGATGTTGA GCGAGAAGAG AAGCAGGAAG ATATCTTGCA GCTACTGAAA 
CGTGGTAATC CAAAAGATAC ATTTTAA
 
Protein sequence
MKQPNKAPRA NIAAPKGTAT PKRRRKTRDE LDAEARDRKR QKKHSGNRSG ARTNVEGSNK 
KGHSQTQEKD PRVGSKVPVP LVIESQVKAK SMPKPVENNV VKPRLTPEEE LAKLENDERL 
DALLDRLDND EVLNKEDQAY VDLTLDRIDA LMEQLGIELG DDEDDVEREE KQEDILQLLK 
RGNPKDTF