Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4192 |
Symbol | |
ID | 6088198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4625786 |
End bp | 4627159 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641599291 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001722904 |
Protein GI | 170026399 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.799407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAGC ACGCTATAGT TTGGGATCTA TCCCTGATTC AAAAATATAA TTATTCAGGG CCGCGTTATA CCTCGTATCC AACGGCTCTT GAGTTTAGTG AAGATTACAA TGAGTCTGCT TTCCAGCAGG CGGTGAAACG TTATCCGCAA CGGCCATTGT CGCTGTATGT GCATATTCCG TTTTGCCACA AACTTTGCTA CTTCTGTGGC TGCAATAAAC TGGTGACGCG TCAGCAACAT AAAGCTGATG AATATCTGGT GGTGTTGGAA AAAGAGATCC GCCAGCGGGC TGCCTTATTT ACCGGGCGTC AGGTCAGCCA GATGCACTGG GGGGGGGGTA CGCCAACCTA TCTGAATAAA ACGCAAATCA GCCATTTAAT GACGGTGCTG CGTGAACACT TTGATTTTCT GCCCGATGCG GAGCAGTCAA TCGAAGTTGA CCCCCGTGAA ATTGAATTAG ATGTGCTTGA TCACCTGCGT GCTGAAGGGT TTAATCGCCT GAGCATGGGG GTGCAGGATT TCAATAAAGA GGTGCAGCGG CTGGTTAACC GCGAGCAAGA TGAAGATTTT ATCTTCGCTT TAATTGCCCG AGCTAAAGCG CTTGGATTTA ACTCAACCAA TATTGATTTG ATTTATGGCT TGCCCAAGCA GACACCAGAA AGTTTTGCTT TCACCTTAAA ACGGGTTGCT GAGCTGAACC CAGATCGCTT AAGCGTGTTT AATTACGCCC ATCTGCCAAG CCTGTTTGCC GCCCAACGTA AAATCAAAGA CGCTGATCTG CCAACGGCGG AGCAACGGTT GGATATTTTG CAGCACACCA TCCGTTTCTT AACGGAGTCT GGCTATCAAT TCATTGGGAT GGATCATTTT GCGCGTCCGG ATGATGAACT GGCAATTGCT CAGCAGGAAG GAACATTACA CCGCAACTTT CAAGGGTATA CCACGCAGGG TGAGAGCGAT CTCCTTGGGT TGGGGGTTTC TGCTATCAGC ATGTTAGGTG ACAGCTACGC TCAGAATGAA AAAGATCTGG AAACATATTA CGCCTGTGTA GAGCAACGGG GTAATGCGTT GTGGCGCGGC CTGACTATGA CCGAAGACGA TTGTTTACGC CGAGATGTGA TTAAAACGCT GATTTGTCAT TTCCAACTCA GTTACCAGCC GATTGAGCAG CGTTATGGTA TTCGGTTTGC CGATTATTTT GCCGAAGATT TTGAGCTGCT TGCACCTTTT GAACAGGATG GGCTGGTGGA GCGAAATGAA ACAGGGCTTC GCGTGACCCC CCGTGGGCGC TTACTCATTC GTAATATTTG TATGTGTTTC GATATCTATT TACGTAAACA GGCGCGCAAG CAGCAATTCT CACGTGTAAT CTGA
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Protein sequence | MSEHAIVWDL SLIQKYNYSG PRYTSYPTAL EFSEDYNESA FQQAVKRYPQ RPLSLYVHIP FCHKLCYFCG CNKLVTRQQH KADEYLVVLE KEIRQRAALF TGRQVSQMHW GGGTPTYLNK TQISHLMTVL REHFDFLPDA EQSIEVDPRE IELDVLDHLR AEGFNRLSMG VQDFNKEVQR LVNREQDEDF IFALIARAKA LGFNSTNIDL IYGLPKQTPE SFAFTLKRVA ELNPDRLSVF NYAHLPSLFA AQRKIKDADL PTAEQRLDIL QHTIRFLTES GYQFIGMDHF ARPDDELAIA QQEGTLHRNF QGYTTQGESD LLGLGVSAIS MLGDSYAQNE KDLETYYACV EQRGNALWRG LTMTEDDCLR RDVIKTLICH FQLSYQPIEQ RYGIRFADYF AEDFELLAPF EQDGLVERNE TGLRVTPRGR LLIRNICMCF DIYLRKQARK QQFSRVI
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