Gene YPK_4186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4186 
Symbolrbn 
ID6088057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4617323 
End bp4618207 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content48% 
IMG OID641599285 
Productribonuclease BN 
Protein accessionYP_001722898 
Protein GI170026393 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTT TCCGGCGTTT TCGCTTACTT TCCCCCTTAA AACCCTGTGT CACTTTTGGG 
CGGATGCTAT ACACCCGAAT TGATAAAGAT GGTCTGACGA TGCTGGCCGG GCATTTGGCC
TATGTTTCGT TGCTCTCTTT GGTCCCCTTG ATTACGGTGA TTTTTGCGTT ATTCGCTGCT
TTCCCGATGT TTGCTGAGAT CAGCATAAAG TTAAAAGCCT TTATATTTGC TAACTTTATG
CCTGCCACGG GTGACATCAT CCAAAATTAT CTTGAGCAGT TTGTCGCCAA CTCCAATCGT
ATGACCGTGG TAGGCACCTG TGGTCTGATC GTCACCGCGT TATTACTGAT TTACTCCGTC
GATAGTGTGC TCAATATTAT TTGGCGCAGT AAAATTCAGC GCTCACTGGT CTTTTCATTT
GCAGTTTATT GGATGGTATT GACGCTGGGG CCGATCCTGG TGGGGGCCAG CATGGTTATC
AGTTCGTATT TACTGTCACT ACACTGGCTG GCACACGCCA GGGTAGATAG CATGATCGAT
GAGATATTAC GGGTATTTCC GTTATTGATC TCCTGGGTTT CTTTTTGGCT ATTGTATAGC
GTGGTGCCCA CGGTACGGGT GCCTGCTCGA GATGCGCTTA TCGGCGCACT GGTAGCTGCA
TTACTCTTTG AGTTGGGTAA GAAAGGGTTC GCGATGTATA TCACGCTGTT TCCCTCTTAT
CAGTTGATTT ATGGGGTATT AGCGGTCATT CCCATTTTAT TCCTCTGGGT GTACTGGAGT
TGGTGCATTG TGTTATTAGG TGCGGAAATC ACCGTGACAT TGGGTGAATA CCGCGCCGAG
CGCCATCACG CGAAGAACGT CATCACCCAG AGTCCGGAGA TGTAA
 
Protein sequence
MASFRRFRLL SPLKPCVTFG RMLYTRIDKD GLTMLAGHLA YVSLLSLVPL ITVIFALFAA 
FPMFAEISIK LKAFIFANFM PATGDIIQNY LEQFVANSNR MTVVGTCGLI VTALLLIYSV
DSVLNIIWRS KIQRSLVFSF AVYWMVLTLG PILVGASMVI SSYLLSLHWL AHARVDSMID
EILRVFPLLI SWVSFWLLYS VVPTVRVPAR DALIGALVAA LLFELGKKGF AMYITLFPSY
QLIYGVLAVI PILFLWVYWS WCIVLLGAEI TVTLGEYRAE RHHAKNVITQ SPEM