Gene YPK_4179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4179 
Symbol 
ID6087997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4607836 
End bp4608495 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content50% 
IMG OID641599278 
ProducttRNA guanosine-2'-O-methyltransferase 
Protein accessionYP_001722891 
Protein GI170026386 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGCCA CCAGGCAACC CGATTTAACG GTCTGTCTGG AGCAAGTCCA CAAACCTCAT 
AATGTCTCCG CCATTATTCG AACTGCCGAT GCCGTGGGCA TCCATCAAGT TCATGCCATC
TGGCCAACAA CGCAAATGTA TACTCGGCTG TCCGCCGCCG CAGGCAGTAA TAGCTGGGTG
CAAGTCAAAA CGCATCCCCA TATTGCTGAT GCCATTGCTT ATCTAAAATC ACAAGATATG
CAAATTCTGG CGACACATCT GTCTGATAAG GCTGTTGATT TTCGTGAAAT CGATTATACC
CGCCCTACCT GTATTTTAAT GGGTCAGGAA AAAACCGGTA TTTCACCAGA AGCGCTGGCA
CTGGCCGATC AAGACATCAT CATTCCAATG ATCGGCATGG TACAGTCGCT GAATGTTTCC
GTCGCTTCCG CGCTAATTTT ATATGAAGCA CAGCGGCAAC GGCAGAATGC CGGGATGTAT
AAACGGACAC ACAGCGTTCT GGCAGAGAGT GAGCAGCAAC GGCTATTGTT TGAAGGGGGT
TACCCGGTAT TGGCACACGT TGCCAAACGT AAAGGGCTCC CCCAACCTCA TATTGATGAA
CAAGGCCAAA TCATTGCCGA TGCGCAATGG TGGTCGGCCA TGCAAGCCAC GGAGTCTTAA
 
Protein sequence
MLATRQPDLT VCLEQVHKPH NVSAIIRTAD AVGIHQVHAI WPTTQMYTRL SAAAGSNSWV 
QVKTHPHIAD AIAYLKSQDM QILATHLSDK AVDFREIDYT RPTCILMGQE KTGISPEALA
LADQDIIIPM IGMVQSLNVS VASALILYEA QRQRQNAGMY KRTHSVLAES EQQRLLFEGG
YPVLAHVAKR KGLPQPHIDE QGQIIADAQW WSAMQATES