| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4177 |
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| Symbol | rpoZ |
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| ID | 6089577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4605394 |
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| End bp | 4605669 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641599276 |
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| Product | DNA-directed RNA polymerase subunit omega |
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| Protein accession | YP_001722889 |
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| Protein GI | 170026384 |
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| COG category | [K] Transcription |
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| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
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| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00539722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGCG TAACTGTTCA AGACGCTGTA GAGAAAATTG GTAACCGTTT TGACCTGGTG
TTGGTCGCTG CTCGTCGGGC ACGTCAAATC CAGTCCGGCG GTAAAGACGC ACTGGTTCCA
GAAGAGAACG ATAAAGTTAC TGTAATCGCG TTACGTGAGA TCGAAGAAGG CCTGATCACC
AATCAGATTC TCGATGTTCG TGAGCGCCAA GAGCAGCAAG AGCAGGAAGC CGCAGAGATC
CAAGCGGTTA CCGCCATTGC TGAAGGTCGT CGTTAA
|
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| Protein sequence | MARVTVQDAV EKIGNRFDLV LVAARRARQI QSGGKDALVP EENDKVTVIA LREIEEGLIT
NQILDVRERQ EQQEQEAAEI QAVTAIAEGR R
|
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