| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4152 |
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| Symbol | |
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| ID | 6087866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4584852 |
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| End bp | 4585661 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641599251 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001722864 |
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| Protein GI | 170026359 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000225921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAT TACCAGAAGT TGAAACCAGC CGCCGCGGGA TCGAACCTTA TCTTGTCGGC
CAGACAATCC TTTATGCTGT GGTCAGAAAT GCCCGTTTAC GCTGGCCGGT ATCCGATGAA
ATTCTAACAC TTAGCGATCA ACCCGTACTG AGTGTCCAAC GCCGGGCGAA GTATTTACTG
CTAGAGCTGC CTAAAGGCTG GATCATCATA CATTTAGGTA TGTCAGGTAG CCTGCGCGTA
TTATCTGAAG AGACTGCAGC TGAAAAGCAC GATCATGTCG ATTTGGTGGT CAGTAACGGA
AAAATATTGC GTTATACCGA CCCACGACGT TTTGGTGCCT GGTTGTGGGC GAAAGACCTT
GAGACCAGTA ATGTATTAGC CCATTTAGGG CCAGAACCAC TAAGTGATGA ATTTACTGCG
CAATATCTGT TCGATAAATC ACGTAATAAA CGCACATTGA TTAAACCGTG GTTGATGGAT
AACAAAGTGG TCGTCGGAGT GGGTAACATT TATGCGAGCG AATCACTGTT TGCTGCTGGG
ATTTTGCCAG ATCGTGCCGC AGGCTCATTG ACTGACGCTG AATCCGTATT GCTGGTAGCA
ACGATAAAAG CCGTGTTATT GCATTCGATT GAGCAGGGCG GCACCACATT ACGTGATTTT
CTGCAGTCGG ATGGTAAACC AGGGTATTTC GCGCAAGAGT TGCAGGTCTA TGGGCGTGCG
GGTGAACCAT GTCGGCAGTG TGGGCATCCC ATTGAAATAG CGAAACACGG GCAGCGCAGC
ACGTTCTTTT GCCGCCACTG CCAGCATTGA
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| Protein sequence | MPELPEVETS RRGIEPYLVG QTILYAVVRN ARLRWPVSDE ILTLSDQPVL SVQRRAKYLL
LELPKGWIII HLGMSGSLRV LSEETAAEKH DHVDLVVSNG KILRYTDPRR FGAWLWAKDL
ETSNVLAHLG PEPLSDEFTA QYLFDKSRNK RTLIKPWLMD NKVVVGVGNI YASESLFAAG
ILPDRAAGSL TDAESVLLVA TIKAVLLHSI EQGGTTLRDF LQSDGKPGYF AQELQVYGRA
GEPCRQCGHP IEIAKHGQRS TFFCRHCQH
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