Gene YPK_4134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4134 
Symbol 
ID6090691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4566575 
End bp4567639 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content52% 
IMG OID641599233 
ProductAraC family transcriptional regulator 
Protein accessionYP_001722846 
Protein GI170026341 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase
[COG2169] Adenosine deaminase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0607807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACG TAAAAGACCC TCGCTGGGCC GCGATTATCA ATCGGGATAA AACCGCCGAT 
GGTCAGTTTG TGTATGCGGT AAAAACGACG GGCATATATT GCCGCCCCTC TTGCCCATCT
CGTCGAGCCA AAGCAGAACA CATTGAATTC TTTATCGATA ATACGGCAGC AGAGCAAGCC
GGTTATCGGC CTTGTAAGCG TTGCCAGCCA ACTCAATTAT CGCGGGCGCA GCAACAGGTA
GAAAAAATCA GTCAGGCATG TCGGTTGATT GAACTGGCAG AAACTCCCCC TAAGCTGAAT
GAATTGGCAG CTCAACTGGG GCTTAGCACT TTTTATTTTC ATCGGTTGTT TAAAGCCATC
ACCGGGCTGA CGCCCAAAGG ATATGCTAAC GCGACCCGCA GTGAGCGTAT TCGTGCACAA
CTGTCTCATG GCGGTTCGGT CACTGACGCT ATCTTTGAGG CCGGTTATAA CTCGAGTAGT
CGATTTTATG CGCAATCACA GCAGTTGCTG GGAATGACAC CAACCCGTTA CCGCAAAGGG
GGCTGTGATG CCAGGTTGCA TTTTGCCGTT GGGGAGAGTT CTCTGGGCGC GATTTTAGTG
GCAAAAAGTG AGTTGGGCGT CTGTGCTATT TTGCTGGGTG ATGACCCAGT GCGGTTAGTA
CAACAGCTAC AGGATAAATT TCCACAGGCC AATTTAGTCG GCGGTGATGC TGAGTTTGAG
CAATGGGTGG CGCAGGTTGT GGGGTGCGTT GAGGCACCCA AACTTGGGTT GAACCTACCG
TTGGATATCC GTGGCACTGC ATTCCAGCAG CGGGTATGGC AGGCTTTGCG GGAGATACCG
ATAGGTGAAA CCGCCAGTTA TGCAGATATC GCGAGCCGAA TCGGTTCACC CACAGCGGTA
CGTGCTGTCG CAGGCGCTTG TGCTGCTAAC ATATTGGCAG TTGCTATCCC CTGTCATCGA
GTCATTCGTC AGGATGGGGC ATTATCGGGT TACCGTTGGG GCGTGGAGCG CAAGAGGCTT
TTGCTGGAAA GAGAGAGTGT GGAAAAAGAG GCGGAAGACC ACTGA
 
Protein sequence
MNNVKDPRWA AIINRDKTAD GQFVYAVKTT GIYCRPSCPS RRAKAEHIEF FIDNTAAEQA 
GYRPCKRCQP TQLSRAQQQV EKISQACRLI ELAETPPKLN ELAAQLGLST FYFHRLFKAI
TGLTPKGYAN ATRSERIRAQ LSHGGSVTDA IFEAGYNSSS RFYAQSQQLL GMTPTRYRKG
GCDARLHFAV GESSLGAILV AKSELGVCAI LLGDDPVRLV QQLQDKFPQA NLVGGDAEFE
QWVAQVVGCV EAPKLGLNLP LDIRGTAFQQ RVWQALREIP IGETASYADI ASRIGSPTAV
RAVAGACAAN ILAVAIPCHR VIRQDGALSG YRWGVERKRL LLERESVEKE AEDH