| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4134 |
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| Symbol | |
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| ID | 6090691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4566575 |
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| End bp | 4567639 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641599233 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001722846 |
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| Protein GI | 170026341 |
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| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase
[COG2169] Adenosine deaminase |
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| TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0607807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACG TAAAAGACCC TCGCTGGGCC GCGATTATCA ATCGGGATAA AACCGCCGAT
GGTCAGTTTG TGTATGCGGT AAAAACGACG GGCATATATT GCCGCCCCTC TTGCCCATCT
CGTCGAGCCA AAGCAGAACA CATTGAATTC TTTATCGATA ATACGGCAGC AGAGCAAGCC
GGTTATCGGC CTTGTAAGCG TTGCCAGCCA ACTCAATTAT CGCGGGCGCA GCAACAGGTA
GAAAAAATCA GTCAGGCATG TCGGTTGATT GAACTGGCAG AAACTCCCCC TAAGCTGAAT
GAATTGGCAG CTCAACTGGG GCTTAGCACT TTTTATTTTC ATCGGTTGTT TAAAGCCATC
ACCGGGCTGA CGCCCAAAGG ATATGCTAAC GCGACCCGCA GTGAGCGTAT TCGTGCACAA
CTGTCTCATG GCGGTTCGGT CACTGACGCT ATCTTTGAGG CCGGTTATAA CTCGAGTAGT
CGATTTTATG CGCAATCACA GCAGTTGCTG GGAATGACAC CAACCCGTTA CCGCAAAGGG
GGCTGTGATG CCAGGTTGCA TTTTGCCGTT GGGGAGAGTT CTCTGGGCGC GATTTTAGTG
GCAAAAAGTG AGTTGGGCGT CTGTGCTATT TTGCTGGGTG ATGACCCAGT GCGGTTAGTA
CAACAGCTAC AGGATAAATT TCCACAGGCC AATTTAGTCG GCGGTGATGC TGAGTTTGAG
CAATGGGTGG CGCAGGTTGT GGGGTGCGTT GAGGCACCCA AACTTGGGTT GAACCTACCG
TTGGATATCC GTGGCACTGC ATTCCAGCAG CGGGTATGGC AGGCTTTGCG GGAGATACCG
ATAGGTGAAA CCGCCAGTTA TGCAGATATC GCGAGCCGAA TCGGTTCACC CACAGCGGTA
CGTGCTGTCG CAGGCGCTTG TGCTGCTAAC ATATTGGCAG TTGCTATCCC CTGTCATCGA
GTCATTCGTC AGGATGGGGC ATTATCGGGT TACCGTTGGG GCGTGGAGCG CAAGAGGCTT
TTGCTGGAAA GAGAGAGTGT GGAAAAAGAG GCGGAAGACC ACTGA
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| Protein sequence | MNNVKDPRWA AIINRDKTAD GQFVYAVKTT GIYCRPSCPS RRAKAEHIEF FIDNTAAEQA
GYRPCKRCQP TQLSRAQQQV EKISQACRLI ELAETPPKLN ELAAQLGLST FYFHRLFKAI
TGLTPKGYAN ATRSERIRAQ LSHGGSVTDA IFEAGYNSSS RFYAQSQQLL GMTPTRYRKG
GCDARLHFAV GESSLGAILV AKSELGVCAI LLGDDPVRLV QQLQDKFPQA NLVGGDAEFE
QWVAQVVGCV EAPKLGLNLP LDIRGTAFQQ RVWQALREIP IGETASYADI ASRIGSPTAV
RAVAGACAAN ILAVAIPCHR VIRQDGALSG YRWGVERKRL LLERESVEKE AEDH
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