| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4132 |
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| Symbol | |
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| ID | 6088155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4564455 |
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| End bp | 4565153 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641599231 |
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| Product | DNA-binding transcriptional regulator CpxR |
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| Protein accession | YP_001722844 |
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| Protein GI | 170026339 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000494358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAA TCCTATTAGT TGATGATGAC CGTGAACTGA CGTCGCTGTT GAAAGAATTG
TTGGAAATGG AGGGTTTCAA TGTTGTGGTC GCCTATGATG GCGAACAAGC GTTAAGCCAG
CTAGATAGCT CTATCGACTT GTTATTGCTT GATATTATGA TGCCGCGTAA AAACGGTATC
GAAACCTTGA AAGAATTACG CCAACACCAT CAGACCCCGG TGATTATGCT GACTGCCCGT
GGTAGTGAGT TGGATCGGGT GCTTGGCCTG GAATTAGGGG CCGATGATTA TCTGGCAAAA
CCGTTTAATG ATCGCGAGCT GGTTGCTCGT ATCCGCGCGA TTTTACGCCG CTCCAATTGG
AGTGAACAGC AACAAAATGC CGAGCAAGGC GCGCCTACAC TGGAAGTTGA TTGCCTGCAA
TTGAATCCGG GTCGTCAGGA AGCCAGTTTT GAAGGCCAAC CACTGGAATT AACCGGCACT
GAGTTCACCC TGCTCTATCT GCTGGCTCAG CACCTTGGCC AAGTGGTGTC GCGGGAGCAT
CTTAGCCAAG AGGTTCTGGG GAAACGATTG ACCCCCTTTG ACCGCGCGAT TGATATGCAC
ATCTCGAACT TACGCCGTAA GTTACCAGAC CGCAAAGACG GGCTACCGTG GTTTAAAACG
TTGCGTGGCC GCGGCTACTT GATGGTATCA GAAACATGA
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| Protein sequence | MHKILLVDDD RELTSLLKEL LEMEGFNVVV AYDGEQALSQ LDSSIDLLLL DIMMPRKNGI
ETLKELRQHH QTPVIMLTAR GSELDRVLGL ELGADDYLAK PFNDRELVAR IRAILRRSNW
SEQQQNAEQG APTLEVDCLQ LNPGRQEASF EGQPLELTGT EFTLLYLLAQ HLGQVVSREH
LSQEVLGKRL TPFDRAIDMH ISNLRRKLPD RKDGLPWFKT LRGRGYLMVS ET
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