| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4127 |
|---|
| Symbol | fieF |
|---|
| ID | 6091360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 4560694 |
|---|
| End bp | 4561596 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641599226 |
|---|
| Product | ferrous iron efflux protein F |
|---|
| Protein accession | YP_001722839 |
|---|
| Protein GI | 170026334 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCAC AATATGCGCG TTGGGTTAAA GCCGCTGCGC TCAGTGCTAC CGCATTAGCA
TCAATCTTAC TGATCATTAA AATTTTTGCC TGGTGGCATA CAGGTTCGGT GAGTTTGTTG
GCGGCGTTAG TTGACTCTTT GGTGGATCTG GCAGCCTCTC TGACAAACTT ATTTGTCGTG
CGTTACTCTC TGCAACCTGC TGATGAAGAA CATACTTTTG GTCATGGTAA GGCGGAGTCC
TTGGCGGCTC TGGCCCAAAG TATGTTTATT TCCGGCTCCG CTTTATTTCT TTTCCTGACC
GGTTTTCGGC ATTTGGCCTC ACCGGAGCCA CTGCAAGATC CTAGTATAGG CATCGGGGTA
ACGTTAGTCG CATTGTTCAG TACACTGATA TTAGTCACAT TTCAGCGTTG GGTAGTACGA
AAAACACACA GTCAGGCGAT TCGTGCCGAT ATGTTGCACT ATCAATCTGA CGTCTTGATG
AATGGTGCTA TTCTTATTGC GTTGGCATTG AGTTGGTATG GTTTTCGCCG GGCGGATGCA
TTGTTCGCGT TGGGTATCGG TGTTTATATT CTTTATAGCG CGTTACGTAT GGGCTATGAA
GCGGTGCAGT CCTTGCTAGA CCGTGCGCTG CCTGATGATG AGCGGCAGCA GATTATCGAT
ATTGTGACGT CATGGCCGGG GGTGATCGGG GCACATGACT TACGTACCCG CCGGTCAGGG
CAAACACGTT TTATTCAGCT CCATCTGGAG ATGGAGGATA TGATGCCGTT AATGGAGGCG
CATGTGTTAG CTGAACAAGT TGAACATGCC TTACTGTACC GTTTCCCAGG GGCAGATGTG
CTTATTCATC AAGACCCATG TTCTGTTGTC CCTAAAGAGC GTCATGCGCA CTGGGAATTA
TAA
|
|---|
| Protein sequence | MDPQYARWVK AAALSATALA SILLIIKIFA WWHTGSVSLL AALVDSLVDL AASLTNLFVV
RYSLQPADEE HTFGHGKAES LAALAQSMFI SGSALFLFLT GFRHLASPEP LQDPSIGIGV
TLVALFSTLI LVTFQRWVVR KTHSQAIRAD MLHYQSDVLM NGAILIALAL SWYGFRRADA
LFALGIGVYI LYSALRMGYE AVQSLLDRAL PDDERQQIID IVTSWPGVIG AHDLRTRRSG
QTRFIQLHLE MEDMMPLMEA HVLAEQVEHA LLYRFPGADV LIHQDPCSVV PKERHAHWEL
|
|---|
| |