Gene YPK_4105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4105 
Symbol 
ID6089522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp4537397 
End bp4538314 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content49% 
IMG OID641599204 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_001722817 
Protein GI170026312 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTAT CAATCAACAC CAACCAAACC CAGGCTTGGC TGGAAAGCCT ACGACCACGC 
ACCCTACCAT TGGCGTTCGC CTCTATCGTT ACCGGTTCAG CCCTGGCTGT CTGGCTCGAT 
AGTTTTAAAC CCGCCGTGGC ACTATTAGCC CTATTAACTG CCGGTCTACT GCAAATTCTA 
TCCAATCTGG CTAACGACTA TGGCGATGCG GTGAAAGGCA GCGATACCGA AGAACGTATC 
GGGCCATTAC GCGGTATGCA AAAAGGGATA ATTAGCCACC AGCAAATGAA AGTGGCGCTA 
ATTATCACCG TGATCTTAAC AATCATTTCA GGTATCGCCC TCATTGCCGT CGCCTGTGAA 
AAGCCCAGCG ATATTCTTGG ATTTTTACTG CTTGGTCTGA TGGCGATTGT TGCCGCCATT 
ACTTACACCG TGGGGAGAAA ACCCTATGGT TATATGGGAT TGGGTGATAT TTCGGTATTG 
GTATTCTTCG GTTGGTTAAG CGTCGCAGGG ACCTATTATC TTCAAGCTGG CCACTTTGAT 
AGCATCGTCA TGCTGCCGGC CACGGCCTGT GGTTTACTGG CCACGGCGGT ATTAAATATT 
AATAACTTAC GCGATATCGA AAATGATAAA GCAAATGGCA AAAATACGCT GGCAGTCCGT 
CTAGGGCCTG TCGTAGCACG CTATTATCAT GCGCTGTTAA TCAGTGCCGC CATCTTCTGC 
CTGGCACTCT TCAGCATTCT CCATCTGCAC AGTTGGCACG GTTGGATCTT TTTATTAGCG 
ATCCCATTAC TGGGAAAACA TGCGCTGTTT GTTTTACGGG ACCCTACCGC AGCAGGTATG 
CGCCCTATGC TCGAGCAGAT GGTGAAAGCC GCTTTACTGA CCAATATCCT GTTTGCTGTG 
GGTCTGGTAT TCAGTTAA
 
Protein sequence
MSLSINTNQT QAWLESLRPR TLPLAFASIV TGSALAVWLD SFKPAVALLA LLTAGLLQIL 
SNLANDYGDA VKGSDTEERI GPLRGMQKGI ISHQQMKVAL IITVILTIIS GIALIAVACE 
KPSDILGFLL LGLMAIVAAI TYTVGRKPYG YMGLGDISVL VFFGWLSVAG TYYLQAGHFD 
SIVMLPATAC GLLATAVLNI NNLRDIENDK ANGKNTLAVR LGPVVARYYH ALLISAAIFC 
LALFSILHLH SWHGWIFLLA IPLLGKHALF VLRDPTAAGM RPMLEQMVKA ALLTNILFAV 
GLVFS