Gene YPK_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4088 
Symbol 
ID6090894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4516161 
End bp4516937 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID641599187 
Productacetylglutamate kinase 
Protein accessionYP_001722800 
Protein GI170026295 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACC CGTTGGTCAT TAAATTAGGT GGCGTATTGC TGGACAGCGA AGAAGCACTG 
GAACGCCTGT TTACTGCATT GGTGACCTAT CGTGAGAAAC ATGAGCGCCC GCTTGTGATT
ATGCACGGTG GTGGCTGTCT GGTGGACGAA TTGATGAAAA GACTCGCCTT GCCAGTAGTG
AAGAAGAACG GCCTGCGCGT CACCCCCGCT GATCAGATTG ATATCATTAC TGGCGCACTG
GCGGGTACCG CGAATAAAAC GCTCTTGGCT TGGGCGGTGA AACATCAGAT CAATGCTGTT
GGCTTGTGCC TGGCTGATGG TAATACTGTG ACGGTTACTC TGCTGGATGC TGAATTGGGC
CACGTGGGTA AAGCGCAACC GGGTTCTGCG GCACTGGTAC AAACTTTGTT GGCGGCAGGT
TATATGCCAA TCATCAGCTC AATTGGTATT ACTGTTGAAG GGCAATTGAT GAATGTAAAT
GCCGATCAAG CGGCAACCGC ATTAGCAGCA ACGCTCGGTG CTGATTTAAT CTTATTGTCC
GATGTCAGTG GCATTCTCGA TGGTAAAGGG CAGCGGATTG CTGAAATGAC GGCGCAAAAA
GCAGAGCAAT TAATCGCTCA GGGCATCATC ACCGATGGTA TGGTCGTCAA AGTGAATGCG
GCACTGGATG CCGCGCGTTC ATTAGGTCGC CCGGTTGATA TCGCCAGTTG GCGTCATTCT
GAGCAACTCC CCGCACTGTT CAACGGTGTA CCGATTGGTA CGCGTATTTC GGTCTAA
 
Protein sequence
MMNPLVIKLG GVLLDSEEAL ERLFTALVTY REKHERPLVI MHGGGCLVDE LMKRLALPVV 
KKNGLRVTPA DQIDIITGAL AGTANKTLLA WAVKHQINAV GLCLADGNTV TVTLLDAELG
HVGKAQPGSA ALVQTLLAAG YMPIISSIGI TVEGQLMNVN ADQAATALAA TLGADLILLS
DVSGILDGKG QRIAEMTAQK AEQLIAQGII TDGMVVKVNA ALDAARSLGR PVDIASWRHS
EQLPALFNGV PIGTRISV