| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4086 |
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| Symbol | |
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| ID | 6088158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4511531 |
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| End bp | 4513882 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641599185 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_001722798 |
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| Protein GI | 170026293 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTGG ATAAATTAAA CGTCGAAGGT AAAGGGAATG CCCATGATAG CGATTGGATA
TATGACGAAC CCCGCTCGGT CAGTGAAATT ACGCGGGAAC AACTTGATAA CCGGCCCGCT
CGCCACGCTG CAGATATTTT AGAACAAACT CCCGGTGTCT ATTCCAGCGT TAGCCAACAA
GACCCTGGGC TTTCAATAAA TATTCGCGGC ATACAAGATT ATGGCCGTGT AAATATGAAT
ATTGACGGTA TGCGTCAGAA CTTTATGAAA AGCGGTCATG GTCAGCGCAA TGGGTCGATG
TATATTGACC CAGAAATTTT AAGCAATGTG GTGATTGAAC GGGGCATTTT CAACGGTATT
GGTGGGGCGG GAGCCATTGG CGGTATCGCC ACCTTTAATA CCATCAATGC CAGTGATTTT
TTGGCCCCAG AGAAAGAGCT GGGCGGGCAT ATCCGGGCAA TGACCGGGGA TAACGGCACC
CGCTTTATTG GCAGCGGTGC GTTGGCGCTG GGCAACCCAA ATGGCGATAT ATTACTTGCT
GTTAGTGAAC GTAACCTGAA GGATTATTGG CCGGGGAATA AAGGCGTTTT GGCCGGGTTG
CGTCTCTATA GCCCTACCAG AAACGTCGGC GATGACTTAA AGAATACCAA GACATTGTTT
ACAGGCTATA AAATGCGTTC GCAGCTCGCT AAAGTCGGTT GGAATTTTGA GGCCGGCCAG
CGTTTGGAGT TCAGCTATTT ACAAACACAA ATCGCCAGCC CCAATGCCAG TATGCTGTCA
GAAGTTCTGG CATTGTCGCC ATCAGGGAAA GAGATAACAA AGATTGGCTG GAGGAACACA
AGTTTTACTA ACGTGGAAAA CCGTAATATT GCGTTAGATT ACCGCCTGAA TCCTGAGCAT
ATTAGTTGGC TGGATGCAAC GGCAAAGATC TATTACGTTG ATACCAATGA TGAAACTGAT
AATGCTAATT CCCTTTTCAA GGAATATTTC TGGACTCAAA CACGCCTGAA AACCCGTGGC
TTACAATTGC AAAACACCAA TACCTTTACC CCATCGGATG CGCATCAAAT ACGGTTGAAA
TATGGTTTGG AATGGTTTAG CGATAAATCT GAGGGGTACT CAACACGCAA ACTTATTGAA
AGAACGACCC CCCCCGGCAA GCGCGCTATC ACCAGTACCT TTGCTCAACT TAACTACGAA
TATGATGATT GGCTGCGGTT GGAAGGAGGG CTGCGTTATG ATCAATTCCG TTTGAAAGGC
AATACCTGGC TCCATACCCG CTCTTTCCTG CAGCCCTATA CTTTTGAGAA CCCCTGTGAC
CGAAGGATAC ATGAGCAGTC TGAAAAGCCT GGATCGCGGT GTTCATCTAG GAGACCCGCA
ACAATGAGGT GGGATGTTGA CCGCCGTGAA CAGCAACTCT CGCCAACGTT GGCGATGGGG
GTCAAGCCTG GCCTCGAATG GCTGGAGTTT TTTGGCAGCT ACGGTAAATC CTGGCGGCCA
CCGGCAATGA CAGAAGTGTT AGCAACCGGC ACCGCCCATG GTTACAGTTG GGTCTTACCT
AATCCTTTCG TGGCCGCCGA ACGTGCCAGA ACGTGGGAGG CGGGGTTTAA TATTCAGCAG
TCCAATTTAT TTATCGAAGA CGATCACTTT GCCGCGAAGG TCGCTTATTT TGATACCCGT
ATTGCCAACT ATATTAACCT TGAATTAGGT AAGGCCAAAC CCAAGTTTGG GGGGGATTCT
TTTACTGATG TAGCTTATGT CAATAATTTA CTCAAAACCC GTTTCCGTGG CTTAGAATAT
CAATTAAGTT ATGATGCTGG CACATTTTAT ACCAATATTA ATTACACCAG AATGATTGGT
GTAAATAATG TTTGTTCACC ATATGCTTGG TTAGGCGGCT TACAGTCAGT AAAATATAAG
TACGTTGGAA AGGTAGAGCA AATTTATGCC GTTGAAAATG AGGTGGCCAA TAATTATGTA
ACCTGTATGA ATGCCAATGT GTTATTTGGC TCATCGGCTT ATTTACCGGG TGATCGCGGT
AGTTTAACTT TGGGGAGTAG AATATTTGAT AGAAGGCTAG ATTTTGGTAC TGTTATCCGT
TATAACAAAG GGTATCAGGA TCGTTCAGCG CAAGATGAAA ATGGTAATCC ACTGACGGCT
TATGTTGCCG ATTGGCCGAA GTATATCGTA TATGATCTTT ATGCCAGTTA TAAGGTAACG
AATAATTTAA TATTGCGTAG TTCAATAGAA AATATAACTA ACCGTGCATA TTTAGTTAAT
TATGGCGATA CACTTTCATT CGCCCCTAGT CGCGGTAGGA CTATTCAGGG TGGATTTGAA
TATAAATTCT AA
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| Protein sequence | MALDKLNVEG KGNAHDSDWI YDEPRSVSEI TREQLDNRPA RHAADILEQT PGVYSSVSQQ
DPGLSINIRG IQDYGRVNMN IDGMRQNFMK SGHGQRNGSM YIDPEILSNV VIERGIFNGI
GGAGAIGGIA TFNTINASDF LAPEKELGGH IRAMTGDNGT RFIGSGALAL GNPNGDILLA
VSERNLKDYW PGNKGVLAGL RLYSPTRNVG DDLKNTKTLF TGYKMRSQLA KVGWNFEAGQ
RLEFSYLQTQ IASPNASMLS EVLALSPSGK EITKIGWRNT SFTNVENRNI ALDYRLNPEH
ISWLDATAKI YYVDTNDETD NANSLFKEYF WTQTRLKTRG LQLQNTNTFT PSDAHQIRLK
YGLEWFSDKS EGYSTRKLIE RTTPPGKRAI TSTFAQLNYE YDDWLRLEGG LRYDQFRLKG
NTWLHTRSFL QPYTFENPCD RRIHEQSEKP GSRCSSRRPA TMRWDVDRRE QQLSPTLAMG
VKPGLEWLEF FGSYGKSWRP PAMTEVLATG TAHGYSWVLP NPFVAAERAR TWEAGFNIQQ
SNLFIEDDHF AAKVAYFDTR IANYINLELG KAKPKFGGDS FTDVAYVNNL LKTRFRGLEY
QLSYDAGTFY TNINYTRMIG VNNVCSPYAW LGGLQSVKYK YVGKVEQIYA VENEVANNYV
TCMNANVLFG SSAYLPGDRG SLTLGSRIFD RRLDFGTVIR YNKGYQDRSA QDENGNPLTA
YVADWPKYIV YDLYASYKVT NNLILRSSIE NITNRAYLVN YGDTLSFAPS RGRTIQGGFE
YKF
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