Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4082 |
Symbol | |
ID | 6091290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4506446 |
End bp | 4507249 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641599181 |
Product | TonB family protein |
Protein accession | YP_001722794 |
Protein GI | 170026289 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAT TACAGCAGAG CAGTGACAAA CTTATATTTT GGCTAGTCGG GGCCTTATTA GCGTGTGGTA TCCATATTTA TGCACTTTGG TGGCTGAGTA CCGCATCTAT ACCAGCAATA CCCACCAGCT ACCCCGCCGC AATAATGATG GAGCTTTCAG CCGAACCGGA ATTTATGCAA AACTTGCCAC AAAACTCAGT GGTGGGCATA ACGCAGAATA TTATCGAGCC TGCGGTTGAG CAACGGGTCA ACCAGCCGGA TGACATTGTC GATTTACCTA CGCTGCCTGA ACAACCAGAG GGGCAACGGG AGATTACGAG AAAAGAGCCA ATAAAGGTCA AACGGCCAGC TGAAAATAGA GCGACATCGC GTAAACCGGT TAATAAAGAA ACACAAGAAA GTGACAGTAA ACAATCCTCA CCAGCCGCTG CAGCCAGTGC AATGCTTTCA GGGACGAGCC AACAAGTTGC CGCAGCGGTA AACAGTGACT CATCCCACCG TCAGCAAGCT CAAGTGAGTT GGAAAAGTCG TTTACAGGGG CATTTAATGG GGTTTAAGCG TTACCCATCC AGTGCCAGAA AACAGCAACA GCAAGGGACT GCCATGATTC GATTTGTAGT CGATAAAAAT GGTTATGTGT CATCAGTGCA ACTGAGTCAC AGTAGTGGTA CATCCGCTTT AGATCGCGAG GCGTTAGCGA TTATCAAGCG CGCTCAGCCA TTACCGAAAC CGCCTGCTGA GTTGTTATCG CAGGGGCAGA TAACATTATC TCTGCCCGTT GATTTTAATC TAAAAAGGAA ATAA
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Protein sequence | MNRLQQSSDK LIFWLVGALL ACGIHIYALW WLSTASIPAI PTSYPAAIMM ELSAEPEFMQ NLPQNSVVGI TQNIIEPAVE QRVNQPDDIV DLPTLPEQPE GQREITRKEP IKVKRPAENR ATSRKPVNKE TQESDSKQSS PAAAASAMLS GTSQQVAAAV NSDSSHRQQA QVSWKSRLQG HLMGFKRYPS SARKQQQQGT AMIRFVVDKN GYVSSVQLSH SSGTSALDRE ALAIIKRAQP LPKPPAELLS QGQITLSLPV DFNLKRK
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