Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4079 |
Symbol | |
ID | 6091073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4502978 |
End bp | 4503895 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641599178 |
Product | DNA-binding transcriptional regulator OxyR |
Protein accession | YP_001722791 |
Protein GI | 170026286 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTC GTGATCTAGA GTACTTAGTG GCGTTGGCTG AATTTAGGCA CTTCCGGCGT GCCGCCGACT CCTGTCATGT CAGCCAACCC ACATTAAGCG GTCAGATTCG TAAACTGGAA GATGAGTTGG GGATCATGTT GTTGGAGCGA ACTAGTCGTA AGGTGTTGTT TACACAGGCT GGTTTACTGT TGGTGGAGCA GGCGAAAACG GTATTACGGG AAGTGAAAGT ACTGAAAGAG ATGGCCAGTT TACAGGGTGA AAGTATGTCT GGGCCGTTGC ATATTGGGCT TATTCCTACC GTTGGGCCTT ATCTGTTACC ACAAATTATT CCTATGCTGC ATAAAACATT CCCCAAATTG GAAATGTATC TGCATGAAGC CCAGACCCAA AATCTCTTAG CCCAGTTGGA TAGTGGTAAA TTGGATTGTG CCATTTTAGC CCTGGTCAAA GAGACCGAAG CTTTTATCGA AATTCCGTTA TTTGACGAGC CGATGAATCT AGCCATTTAT GCCGATCATC CGTGGGCGAA CCGCGAAAGA GTGGAGATGC ATGAATTGGC GGGAGAGAAG TTACTGATGC TGGAAGATGG TCATTGTTTA CGTGATCAGG CGATGGGCTT TTGCTTCCAG GCTGGAGCGG ATGAAGATAC TCACTTCCGG GCGACTAGCT TGGAAACCCT GCGCAACATG GTCGCAGCGG GTAGTGGTAT TACGCTGTTG CCAGCACTGG CTGTGCCGAA TGAAAGACAG CGCGATGGTG TATGTTATCT GGAGTGCTAC AAACCTGTCC CTAAACGCAC CATTGCGTTG GTGTATCGCC CCGGTTCTCC ATTGCGTGGC CGCTATGAAC AACTTGCCGA GGCAATACGT GATCACATGC AAGAGCGCAT GGCCCCATCA TTAGAACAGG CGATTTAA
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Protein sequence | MNIRDLEYLV ALAEFRHFRR AADSCHVSQP TLSGQIRKLE DELGIMLLER TSRKVLFTQA GLLLVEQAKT VLREVKVLKE MASLQGESMS GPLHIGLIPT VGPYLLPQII PMLHKTFPKL EMYLHEAQTQ NLLAQLDSGK LDCAILALVK ETEAFIEIPL FDEPMNLAIY ADHPWANRER VEMHELAGEK LLMLEDGHCL RDQAMGFCFQ AGADEDTHFR ATSLETLRNM VAAGSGITLL PALAVPNERQ RDGVCYLECY KPVPKRTIAL VYRPGSPLRG RYEQLAEAIR DHMQERMAPS LEQAI
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