Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4078 |
Symbol | |
ID | 6091072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4501595 |
End bp | 4502995 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641599177 |
Product | soluble pyridine nucleotide transhydrogenase |
Protein accession | YP_001722790 |
Protein GI | 170026285 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAGC ACTTCCATTT TGATGCCATT GTGATTGGCT CGGGCCCTGG CGGTGAAGGT GCCGCGATGG GGCTGGTCAA GCAAGGGGCA CGCGTTGCCG TGATTGAACG GTATAATAAT GTGGGTGGCG GATGTACCCA TTGGGGTACC ATTCCTTCTA AAGCCTTGCG CCACGCCGTT AGCCGTATTA TCGAGTTCAA CCAAAACCCC CTCTACAGCG ACAATGCCAG AACCATAAAA TCCTCTTTCG CTGATATTTT AAACCATGCA GATCGTGTTA TTAATCAGCA AACCCGTATG CGGCAAGGCT TTTATGATCG CAACCATTGC CACATGTTCT CAGGTGATGC CAGCTTCATT GATGCCAATA CGGTTAATGT GCGTTACGCC GACGGTACCA GTGATACCTT GCAGGCCGAT AACATTGTCA TTGCAACTGG CTCGCGCCCT TATCGCCCAG TCAATGTTGA TTTTAACCAT GAACGCATTT ATGACAGCGA TACCATTTTG CAGCTCAGCC ATGAGCCACA GCACGTCATT ATTTATGGTG CAGGGGTGAT TGGTTGCGAA TATGCGTCTA TCTTCCGTGG GTTGAGTGTC AAAGTCGATT TGATCAATAC CCGTGACCGC CTACTGGCTT TCCTTGATCA GGAAATGTCA GATGCGCTCT CTTATCACTT CTGGAATAAC GGCGTGGTTA TCCGCCATAA CGAAGAATTT GAGCAGATTG AAGGGACAAC GGACGGCGTG ATTGTCCATT TGAAATCAGG CAAAAAGGTC AAAGCAGACT GCTTGTTATA TGCTAATGGA CGAACAGGTA ATACCAGCGG TTTAGGCTTG GAAAATATTG GCCTGGAAGC CGATAGCCGT GGTTTGCTGA AAGTGAACAG CATGTACCAA ACCGCGCTGT CTCATGTCTA TGCTGTCGGT GATGTGATTG GTTACCCAAG TCTGGCATCT GCGGCTTATG ATCAGGGGCG TATTGCTGCA CAAGCCATGA TCAAAGGTGA AGCCAACGTT CACCTGATTG AAGATATCCC GACAGGCATT TACACCATTC CTGAAATCAG TTCTGTCGGG AAAACCGAAC AAGAGCTGAC GGCGATGAAA GTGCCCTACG AAGTGGGCCG GGCGCAATTT AAACATCTGG CGCGGGCGCA AATTGTTGGG ATGGATACCG GTAGTTTGAA AATCCTGTTC CATCGGGAAA CGAAGCAAAT TTTGGGTATT CATTGCTTTG GTGAACGTGC TGCTGAAATT ATCCACATCG GGCAAGCTAT CATGGAACAG AAAGGAGAAG GCAATACGCT CGAGTATTTC GTTAATACTA CCTTCAACTA CCCAACCATG GCAGAAGCCT ACCGTGTGGC CGCACTCAAT GGCTTAAATC GCCTGTTCTA A
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Protein sequence | MQQHFHFDAI VIGSGPGGEG AAMGLVKQGA RVAVIERYNN VGGGCTHWGT IPSKALRHAV SRIIEFNQNP LYSDNARTIK SSFADILNHA DRVINQQTRM RQGFYDRNHC HMFSGDASFI DANTVNVRYA DGTSDTLQAD NIVIATGSRP YRPVNVDFNH ERIYDSDTIL QLSHEPQHVI IYGAGVIGCE YASIFRGLSV KVDLINTRDR LLAFLDQEMS DALSYHFWNN GVVIRHNEEF EQIEGTTDGV IVHLKSGKKV KADCLLYANG RTGNTSGLGL ENIGLEADSR GLLKVNSMYQ TALSHVYAVG DVIGYPSLAS AAYDQGRIAA QAMIKGEANV HLIEDIPTGI YTIPEISSVG KTEQELTAMK VPYEVGRAQF KHLARAQIVG MDTGSLKILF HRETKQILGI HCFGERAAEI IHIGQAIMEQ KGEGNTLEYF VNTTFNYPTM AEAYRVAALN GLNRLF
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