Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4074 |
Symbol | |
ID | 6087473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4499085 |
End bp | 4500188 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641599173 |
Product | tRNA (uracil-5-)-methyltransferase |
Protein accession | YP_001722786 |
Protein GI | 170026281 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.308645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTCCCA ACATCCTGCC GATTGAAAGC TACGACCACC AACTGGCAGA AAAGTCTGCC CGTCTTAAGG CGATGATGTT GCCATTTCAG GCACCCGAGC CAGAAATATT TCGTTCTCCG GCAGACCATT ACCGTATGAG AGCCGAGTTT CGCGTTTGGC ATGATGAAGA TGACTTGTAC CACATCATGT TTGACCAACA GACCAAGCAA CGTATCCGGG TTGAACAATT CCCGGTAGCC AGTCGGTTAA TCAATCGCTT AATGGATGCT CTGATGACCG CCATCAGAGC GGAGCCGCTA TTGCGACGCA AACTGTTCCA AATAGATTAT TTATCTACCC TCAGCGGTAA GCTGATCGCC TCGTTGCTGT ATCACCGCCA ATTAGATGAA GAGTGGCAGC AAAAAGCGCT GGAACTGCGA GATCAGTTAC GTGCACAAGG TTTTGACCTA CAACTCATTG GTCGAGCAGC TAAAACTAAA ATCATGCTGG ATCACGATTA TATCGATGAG GTCTTGCCAG TCGCCGGACG CGAGATGATC TATCGGCAGG TTGAAAATAG TTTTACCCAA CCTAATGCGG CGGTGAATAT TCACATGTTG GAATGGGCGC TGGATGTTAC CCAAGGTGCC ACTGGCGATT TACTGGAGTT GTATTGTGGT AACGGTAATT TCTCATTGGC ACTGGCGCGA AATTTTGAAC GGGTGCTGGC AACAGAAATT GCCAAACCTT CCGTCGCAGC GGCTCAATAT AATATTGCAG CAAATAATAT CGATAACGTG CAGATTATCC GGATGTCAGC GGAAGAGTTT ACTCAGGCGA TGCAGGGCGT TCGTGAGTTT AACCGCCTGA AGGGTATTGA TTTGGGCAGT TATAATTGCG AGACCATCTT TGTCGATCCG CCACGCAGTG GGCTGGATCA CGAGACGGTT AAGCTAGTAC AGGCTTACCC GCGTATTCTT TATATCTCCT GTAATCCAGA GACGCTGTGC GCCAATTTGG AACAATTACA GCACACACAT AAAATTAGCC GACTAGCACT GTTCGATCAA TTCCCTTATA CCCACCATAT GGAATGTGGG GTACTGCTGG AAAAACGTCA CTGA
|
Protein sequence | MTPNILPIES YDHQLAEKSA RLKAMMLPFQ APEPEIFRSP ADHYRMRAEF RVWHDEDDLY HIMFDQQTKQ RIRVEQFPVA SRLINRLMDA LMTAIRAEPL LRRKLFQIDY LSTLSGKLIA SLLYHRQLDE EWQQKALELR DQLRAQGFDL QLIGRAAKTK IMLDHDYIDE VLPVAGREMI YRQVENSFTQ PNAAVNIHML EWALDVTQGA TGDLLELYCG NGNFSLALAR NFERVLATEI AKPSVAAAQY NIAANNIDNV QIIRMSAEEF TQAMQGVREF NRLKGIDLGS YNCETIFVDP PRSGLDHETV KLVQAYPRIL YISCNPETLC ANLEQLQHTH KISRLALFDQ FPYTHHMECG VLLEKRH
|
| |