Gene YPK_4074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4074 
Symbol 
ID6087473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4499085 
End bp4500188 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content48% 
IMG OID641599173 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_001722786 
Protein GI170026281 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.308645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCCA ACATCCTGCC GATTGAAAGC TACGACCACC AACTGGCAGA AAAGTCTGCC 
CGTCTTAAGG CGATGATGTT GCCATTTCAG GCACCCGAGC CAGAAATATT TCGTTCTCCG
GCAGACCATT ACCGTATGAG AGCCGAGTTT CGCGTTTGGC ATGATGAAGA TGACTTGTAC
CACATCATGT TTGACCAACA GACCAAGCAA CGTATCCGGG TTGAACAATT CCCGGTAGCC
AGTCGGTTAA TCAATCGCTT AATGGATGCT CTGATGACCG CCATCAGAGC GGAGCCGCTA
TTGCGACGCA AACTGTTCCA AATAGATTAT TTATCTACCC TCAGCGGTAA GCTGATCGCC
TCGTTGCTGT ATCACCGCCA ATTAGATGAA GAGTGGCAGC AAAAAGCGCT GGAACTGCGA
GATCAGTTAC GTGCACAAGG TTTTGACCTA CAACTCATTG GTCGAGCAGC TAAAACTAAA
ATCATGCTGG ATCACGATTA TATCGATGAG GTCTTGCCAG TCGCCGGACG CGAGATGATC
TATCGGCAGG TTGAAAATAG TTTTACCCAA CCTAATGCGG CGGTGAATAT TCACATGTTG
GAATGGGCGC TGGATGTTAC CCAAGGTGCC ACTGGCGATT TACTGGAGTT GTATTGTGGT
AACGGTAATT TCTCATTGGC ACTGGCGCGA AATTTTGAAC GGGTGCTGGC AACAGAAATT
GCCAAACCTT CCGTCGCAGC GGCTCAATAT AATATTGCAG CAAATAATAT CGATAACGTG
CAGATTATCC GGATGTCAGC GGAAGAGTTT ACTCAGGCGA TGCAGGGCGT TCGTGAGTTT
AACCGCCTGA AGGGTATTGA TTTGGGCAGT TATAATTGCG AGACCATCTT TGTCGATCCG
CCACGCAGTG GGCTGGATCA CGAGACGGTT AAGCTAGTAC AGGCTTACCC GCGTATTCTT
TATATCTCCT GTAATCCAGA GACGCTGTGC GCCAATTTGG AACAATTACA GCACACACAT
AAAATTAGCC GACTAGCACT GTTCGATCAA TTCCCTTATA CCCACCATAT GGAATGTGGG
GTACTGCTGG AAAAACGTCA CTGA
 
Protein sequence
MTPNILPIES YDHQLAEKSA RLKAMMLPFQ APEPEIFRSP ADHYRMRAEF RVWHDEDDLY 
HIMFDQQTKQ RIRVEQFPVA SRLINRLMDA LMTAIRAEPL LRRKLFQIDY LSTLSGKLIA
SLLYHRQLDE EWQQKALELR DQLRAQGFDL QLIGRAAKTK IMLDHDYIDE VLPVAGREMI
YRQVENSFTQ PNAAVNIHML EWALDVTQGA TGDLLELYCG NGNFSLALAR NFERVLATEI
AKPSVAAAQY NIAANNIDNV QIIRMSAEEF TQAMQGVREF NRLKGIDLGS YNCETIFVDP
PRSGLDHETV KLVQAYPRIL YISCNPETLC ANLEQLQHTH KISRLALFDQ FPYTHHMECG
VLLEKRH