Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4065 |
Symbol | |
ID | 6090151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4484510 |
End bp | 4485502 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641599162 |
Product | inner membrane ABC transporter permease protein YjfF |
Protein accession | YP_001722780 |
Protein GI | 170026275 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.937045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGC GTAATGTTCC CTTGCTGATT ACTATCGCCG TTTTTATTCT GGGATATGCT TTCTGTCTGA GTCAATTTCC CAGTTTCTCC TCCTCTCGAG TATGGTGTGA TTTACTGACT GATAATGCTT TTCTTGGCAT TGTTGCTGTC GGCATGACTT TCGTTATTTT ATCGGGGGGG ATCGATTTAT CTGTCGGCTC GGTTATTGCC TTTACTGGTG TGCTGCTGGC TAAGTTAATT GGTACCTATG GTATTCATCC AGTCTATGCC TTTGCTATCG TCTTAGTTAT GGGCGCAATG TTTGGTGCGT TGATGGGGTG GATTATTGAT TCCCTGAAAC TTCCAGCGTT TATCATTACT CTTGCAGGGA TGTTTTTTAT CCGTGGTATG AGTTTTATCG TTTCTGAAGA GTCGCTGCCG ATTAACCACC CGATATATGA AACGTTGGCT AATTATGCCT GGCGTGTTCC TGGGGGTGGG CGATTTACCT TGTTAGCATT TATTATGCTG ATGGTTGTAG CTTTTGGCAT CCTTTTGGCT CATCACACTC GTTTTGGTCA TAACGTTTAT GCGATTGGCG GTAATAGTGT TTCTGCGGGG TTGATGGGTG TCCCGGTCAG GAGAACGACC ATTAAAATTT ATATGCTATC CAGTACATTG GCCGCATTAT CAGGCATTGT TTTCTCTCTC TACACGTCTG CGGGTTATGC GTTGGCGGCC AGTGGTGTTG AGTTAGATGC TATTGCTGCG GTTGTCATTG GTGGCACATT ACTGGCGGGC GGTATCGGTA CGGTATTCGG TACGTTGTTC GGTGTGTTAA TTCAGGGCCT GATACAGAGT TATATTACTT TCGACGGTAC ACTCAGCTCG TGGTGGACCA AAATTGTGAT TGGTATTTTG CTCTTTAGCT TTATCGTGAT TCAGAAAGCG ATGAGCGCTT TTTATCTCAA CCGCAGATCA CGCCCTCAGT CATCGCCACT TACTCCCGTG TAA
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Protein sequence | MLKRNVPLLI TIAVFILGYA FCLSQFPSFS SSRVWCDLLT DNAFLGIVAV GMTFVILSGG IDLSVGSVIA FTGVLLAKLI GTYGIHPVYA FAIVLVMGAM FGALMGWIID SLKLPAFIIT LAGMFFIRGM SFIVSEESLP INHPIYETLA NYAWRVPGGG RFTLLAFIML MVVAFGILLA HHTRFGHNVY AIGGNSVSAG LMGVPVRRTT IKIYMLSSTL AALSGIVFSL YTSAGYALAA SGVELDAIAA VVIGGTLLAG GIGTVFGTLF GVLIQGLIQS YITFDGTLSS WWTKIVIGIL LFSFIVIQKA MSAFYLNRRS RPQSSPLTPV
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