| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4064 |
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| Symbol | |
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| ID | 6090879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4483642 |
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| End bp | 4484523 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641599161 |
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| Product | transcriptional regulator HdfR |
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| Protein accession | YP_001722779 |
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| Protein GI | 170026274 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.656049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATACCG AATTACTGAA AACCTTTTTA GAGGTCAGTA GAACTCGTCA CTTTGGTCGC
GCAGCTGAAT CTCTGTACTT AACACAGTCG GCGGTAAGTT TCCGTATCCG TCAGTTGGAA
AATCAATTAG GTGCAAACTT ATTCACTCGG CATCGTAATA ATATTCGTCT CACTCCTGCG
GGTGAACGGC TGGTTCCGTA CGCAGAAATG CTGCTGAACA CTTGGCGATT AGCCAAAAAA
GAAGTCATAC ATTCGCTACA ACACACTGAG TTATCCATAG GTGCAACCGC ATCCCTTTGG
GAGGCGTACC TCACTCCATG GTTGCAACAG TTATATGAAC AACAAGAGGA ACTGCGCCTT
GAAGCACGCA TTGCGCTGAG AAACTCACTG GTGAAGCAGT TGCACGAACG GCAACTGGAC
TTGTTGATCA CGACAGAACC GCCCAAAATG GATGAACTGG CCTGCCTGCT ATTAGGCCAT
TTTTCACTGC GGCTTTATTC GTCGTTCTCC CTTGATTTAC CAAAAGAAGA TGACACCCCG
AACGAGCATA AAAATGCAAG TGAAGTGCCT TATATCAAAC TTGAATGGGG GGCTGATTTC
CATCAGCAGG AAAACCGTTT ACTTGATAGT GAGCAGGCGC CAATCCTCAC AACGACCTCT
GCCCATTTAA CCCGCCAGTT GCTTGAAACG ACTGGCGGTT GCGCTTTTCT GCCTGAACAT
TGGCAAAAAG AATACCCACA GCTTGTCATT CATCCTGACA TTCCACCGAT CGTGCGGCCA
CTGTATGCCG TTTGGCTACA AAACAGTGAC CAGCAAGCAT TGATCAGACA ACTCTTAAAA
ACCCCCATGA ATAACGCGAC CCAGAGCGTT ACACGGGAGT AA
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| Protein sequence | MDTELLKTFL EVSRTRHFGR AAESLYLTQS AVSFRIRQLE NQLGANLFTR HRNNIRLTPA
GERLVPYAEM LLNTWRLAKK EVIHSLQHTE LSIGATASLW EAYLTPWLQQ LYEQQEELRL
EARIALRNSL VKQLHERQLD LLITTEPPKM DELACLLLGH FSLRLYSSFS LDLPKEDDTP
NEHKNASEVP YIKLEWGADF HQQENRLLDS EQAPILTTTS AHLTRQLLET TGGCAFLPEH
WQKEYPQLVI HPDIPPIVRP LYAVWLQNSD QQALIRQLLK TPMNNATQSV TRE
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