| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4059 |
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| Symbol | |
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| ID | 6089882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4477933 |
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| End bp | 4478859 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641599156 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001722774 |
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| Protein GI | 170026269 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGAAGA AAGCGGATTA CATTTGGTTT AACGGCGAAA TGGTTCCATG GGCAGAAGCT
AAAGTTCATG TGATGTCTCA CGCGTTACAC TACGGAACGT CAGTCTTCGA AGGTGTCCGT
TGCTACGAAT CCCATAAAGG GCCGGTAGTT TTCCGTCACC GTGAGCATAT GCAGCGTTTG
CATGATTCCG CCAAAATTTA TCGTATGCCC GTCTCCCAGT CAGTGGATGA ACTGATGGAA
GCTTGCCGTG CCACGCTGCG CAAGAATAAT CTGACCAGTG CTTATATTCG CCCGTTAGTC
TTTATTGGTG ATGTCGGCAT GGGCGTGAAT CCACCGGAGG GTTATAACAC TGACGTGATC
ATTGCCGCTT TCCCATGGGG TGCTTATCTG GGTGCAGAAG CCTTGGAGCA AGGCATTGAT
GCTATGGTGT CATCATGGAA CCGTGTTGCA CCCAATACCA TCCCAACGGC GGCGAAAGCA
GGCGGTAACT ACCTTTCATC CTTGCTGGTG GGCAGTGAAG CACGTCGCCA CGGCTATCAG
GAAGGGATTG CGCTGGATGT TCATGGTTAC CTGTCTGAAG GTGCCGGTGA GAACCTGTTC
GAAGTGAAAG ATGGCATCCT GTTCACACCA CCATTTACCT CGTCTGCCCT GCCGGGTATC
ACCCGTGATG CCATTATCAA GCTGGCGAAA GATATGGGGC TGGAAGTGCG TGAGCAAGTG
TTGTCACGTG AGTCTCTGTA TCTGGCCGAT GAAGTGTTTA TGTCCGGTAC TGCAGCGGAA
ATTACCCCAG TACGCAGCGT GGATGGTATT CAGGTTGGTA TTGGCAAGCG CGGCCCGGTC
ACAGCCAAAA TTCAACAAGC GTTCTTCGGC TTGTTTACCG GTGAAACCGA GGACAAATGG
GGCTGGCTGG ATCAGGTTAA TCCATAA
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| Protein sequence | MTKKADYIWF NGEMVPWAEA KVHVMSHALH YGTSVFEGVR CYESHKGPVV FRHREHMQRL
HDSAKIYRMP VSQSVDELME ACRATLRKNN LTSAYIRPLV FIGDVGMGVN PPEGYNTDVI
IAAFPWGAYL GAEALEQGID AMVSSWNRVA PNTIPTAAKA GGNYLSSLLV GSEARRHGYQ
EGIALDVHGY LSEGAGENLF EVKDGILFTP PFTSSALPGI TRDAIIKLAK DMGLEVREQV
LSRESLYLAD EVFMSGTAAE ITPVRSVDGI QVGIGKRGPV TAKIQQAFFG LFTGETEDKW
GWLDQVNP
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