| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4044 |
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| Symbol | |
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| ID | 6089673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4460676 |
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| End bp | 4463327 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641599141 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001722759 |
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| Protein GI | 170026254 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.318083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCAGG CACGGGTCAT TCTGAAAAAA AATTTCTCAG GCCGTAGGAA AGCATTAACA
TTATGTATAA CTTTAATTTT ACATATTGAT ACTGCTTTTG GGCAGGAAGA ACCACAAAAT
TTCGAATTTG ATGAATCTCT TTTTTTAGGG ACAAAATATG CATCAGGTTT GACCCAGCTT
AATAAAAAAA ATTCTATAAC TGCCGGGAAT TATGATGCTG TAGATGTTTT GGTTAATAAC
AAATTGTTCA AACGTATGAG CGTGCAATTT ATTAAAGATG CCAACTCATC TGAGGTTTAT
CCCTGTCTGA GCGACGAGTT ATTAACCGCG GCTGGCGTTG AACTGGGTAG AGAAAATAGC
ACCCCTCCCA AAGAACCCCA TGTTACCGAG GCTAATACTC CCATAACTGA AACTCACGCC
CCAACGAACC AATGTTTACC TCTGTCTACG CGGGTAAAAG GGGCATCCTT TCGATTTGAT
CAGGCTAAAT TACGTTTAGA GCTTTCGATT CCACAGGCTC TATTACAAAA ACGGCCCAGG
GGCTACATTG AGCGGGCGGA ATGGCAGGAA GGCGAAAAAC TCGCATTCAT TAACTACAGC
GCCAACGCTT ATCGCAGTGA TACTCGCGGC CAGCAAAAGA GAACCTCTGA TTTTGGTTTT
ATTGGCCTTA AAAGTGGGAT CAATCTGGGA TTGTGGCAAG TACGCCAGCA ATCGAACGTC
CGCTACGCCA GTAATGATAG TGGCAGCGAT ACCCAGTGGA ATAGCATCCG CACTTATGTG
CAACGCCCGA TCCCACAGTT GGATAGCCAG TTAACGTTAG GCGAAACTTT CACTGACAGT
ACATTATTTG GCAGCATGTC ATTCCTCGGT GCGAAAATGG CTACCGACCA ACGCATGTGG
CCAGTGTCAA TGCGCGGTTT CTCCCCAGAG GTCCGGGGTG TCGCCAGTAC CAACGCACGC
GTTATTATTC GTCAGAATGG ACGTGAAATT TATGAGACGA ACGTCGCTCC TGGCCCGTTC
GTTATTAACG ATTTGTTCAG CACCAGTAGC CAAGGCGACC TTAATGTTGA GGTTATTGAG
GCCAATGGTA GCCGCTCGAC ATTTACGGTG CCATTCAGTG CCGTTCCTGA TTCAATGCGC
CCAGGCGTTA GCCGCTATAA TGCGGTGATC GGGGAATCAC GCGATTTCAC CAATATTGAT
AATTATTTCA CTGACTTCAC CTATGAACGC GGCCTCACCA ATCAACTGAC GGCCAACAGT
GGTGTCCGTT TAGCAAAAGA CTACACGGCA TTACTTGCCG GTGGCGTATT AGGGACACCG
GTCGGTGCTT TGGGCCTCAA TGCCACCTAT TCTCACGCCA AAGTTGAAAA TGATAAAACG
CAAGATGGTT GGCGGATGCA GGCCACCTAT AGCCAGACCT TTAATCAAAC CGGAACCACG
TTCTCTTTAG CCGGGTATCG TTACTCAACG AAAGGGTATC GCGATTTAAA TGATGTGTTC
GGGGTGCGTT CGATGCAAAA AAACGGGGGA ACGTGGGATT CATCAACCTA TAAACAGCGT
AGCCAATTCA CCACTACTAT TAATCAAGAC CTCGGTAATT GGGGCCAGTT ATACACCTCT
GCCTCAACCA GTGATTATTA TAACGATACG GCGAGAGATA CCCAGTTACA GCTAGGCTAT
TCAAATAGTT ATCAGCAAAT CAGTTACAAT TTGGCTGTCA GCCGCCAGCG CAGTGTTTAT
ACCTCCACTC TGTATAACTG GGATAGCCCT GATACCGACG AGACGGCAAC CACCACGCGC
TACGGTAATA CCGAGAACAT CGCAACATTC ACCGTTTCTA TTCCACTGAA TATTGGTAGC
AACAACCAAT ATCTATCAAT GTCAACCAGC CGTAATCCGA AAAGCGGTAA TAACTATCAA
ACATCATTAT CAGGCACCGC CGGTGAGCGA AATTCCTTCA ACTATGCATT AAATGCAGGC
TATGACGACA GCAACTTCGG TAGTAGCTCA AATAATTGGG GGGCCAACGT ACAGAAGCAA
TTCCCCAATG CTACCGTTAA TGGCAGCTAT TCTCGTGGCA ATAATTACAC CCAATATGGC
GCAGGCGCTC GTGGTGCGGC GGTAATACAT CGACAAGGCG TGACTCTGGG CCCTTATCTG
GGTGAGACCT TTGGTTTAAT TGAAGCTAAT GGTGCTCAAG GGGCGACAGT TCGTAATGCC
CAAGGGGCAA GAATTGATAG TAACGGTTTT GCTCTGGTGC CCGCGCTAAC GCCTTATAAC
TACAACACAA TAGGGCTGGA TACCAAGGGG ATTAACCGTA ACACCGAGTT GAAAGAGAAT
CAGGGCCGTG TCGTCCCTTA TGCCGGGGCA GCGGTAAAAG TGAAATTTGA AACACTGACT
GGCTATGCGG TGTTAATTCA AGCCGAAGGT GAGGGGTTAC CACTGGGTGC CGATGTGTAT
AACAGCAAAG ATGAACTGGT TGGAATGGTA GGTCAGGGGA ATCAGATCTA CGCACGGATA
GCCGATAACA AAGGTACACT TGATGTCCGT TGGGGCGAAA GCAGCGGTGA TCAGTGTCAA
TTACCTTATG CTTTTAATCG CCAGGATACC GAGCAAGATA TCATTCATAT AACCGCGAGT
TGCCGCCGTT AA
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| Protein sequence | MVQARVILKK NFSGRRKALT LCITLILHID TAFGQEEPQN FEFDESLFLG TKYASGLTQL
NKKNSITAGN YDAVDVLVNN KLFKRMSVQF IKDANSSEVY PCLSDELLTA AGVELGRENS
TPPKEPHVTE ANTPITETHA PTNQCLPLST RVKGASFRFD QAKLRLELSI PQALLQKRPR
GYIERAEWQE GEKLAFINYS ANAYRSDTRG QQKRTSDFGF IGLKSGINLG LWQVRQQSNV
RYASNDSGSD TQWNSIRTYV QRPIPQLDSQ LTLGETFTDS TLFGSMSFLG AKMATDQRMW
PVSMRGFSPE VRGVASTNAR VIIRQNGREI YETNVAPGPF VINDLFSTSS QGDLNVEVIE
ANGSRSTFTV PFSAVPDSMR PGVSRYNAVI GESRDFTNID NYFTDFTYER GLTNQLTANS
GVRLAKDYTA LLAGGVLGTP VGALGLNATY SHAKVENDKT QDGWRMQATY SQTFNQTGTT
FSLAGYRYST KGYRDLNDVF GVRSMQKNGG TWDSSTYKQR SQFTTTINQD LGNWGQLYTS
ASTSDYYNDT ARDTQLQLGY SNSYQQISYN LAVSRQRSVY TSTLYNWDSP DTDETATTTR
YGNTENIATF TVSIPLNIGS NNQYLSMSTS RNPKSGNNYQ TSLSGTAGER NSFNYALNAG
YDDSNFGSSS NNWGANVQKQ FPNATVNGSY SRGNNYTQYG AGARGAAVIH RQGVTLGPYL
GETFGLIEAN GAQGATVRNA QGARIDSNGF ALVPALTPYN YNTIGLDTKG INRNTELKEN
QGRVVPYAGA AVKVKFETLT GYAVLIQAEG EGLPLGADVY NSKDELVGMV GQGNQIYARI
ADNKGTLDVR WGESSGDQCQ LPYAFNRQDT EQDIIHITAS CRR
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