| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4042 |
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| Symbol | |
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| ID | 6088029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4459323 |
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| End bp | 4459853 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641599139 |
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| Product | fimbrial protein |
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| Protein accession | YP_001722757 |
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| Protein GI | 170026252 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.382298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TTACTTTAGC TATCGCGTTA TTCTCGGCAT CTACAACGGT TGCCATGTCT
GCCAGTAATA ATACGATTAC GTTCCAAGGG GAAGTCACAG CACAAACCTG TTCTGTTACC
GTAAACGGCC TTGAAGCAAA TCCAGTTGTC TTGTTGCCTA CAGTATCAAG TAGCGATTTA
GACGCTTCCG GCCAAACTAA AGGCAAAACA ACCTTTACGC TAGGTGTGTC TGGCTGTACA
TCAGGATCAG ATGATCTTGA TATCAAAACT GTTTTCATCG GTAGCCTGGT TACTGCTACT
GGTAATTTAC AAAATACAGG TACCGCAGGG AACGTTGAAC TTCAATTATT GAAGGATGCC
ACGACAACAA CGGGTATCGA CCTAAATAGT GGTTTGGCAC AAGACGGTAT CGTATTGCTA
GCAGGTGATA CATCTGCGGA GCATGATTTT GCTGTTCAGT ATTATGCCAC TGGGCAATCA
ACACCAGGGT CTGTCATTGC ATCTGTACAG TATGCTGTTT CTTACTTGTA A
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| Protein sequence | MKKITLAIAL FSASTTVAMS ASNNTITFQG EVTAQTCSVT VNGLEANPVV LLPTVSSSDL
DASGQTKGKT TFTLGVSGCT SGSDDLDIKT VFIGSLVTAT GNLQNTGTAG NVELQLLKDA
TTTTGIDLNS GLAQDGIVLL AGDTSAEHDF AVQYYATGQS TPGSVIASVQ YAVSYL
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