Gene YPK_4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4040 
Symbol 
ID6089103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4457205 
End bp4457501 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content45% 
IMG OID641599137 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001722755 
Protein GI170026250 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACTG TTACTATGGC AAACAAAGCT TCTGCACTGC ATATTCTGGT TGATGATGAA 
AAGCAGGCAA ATGACATTCT GGCCCAGTTG AATAACGGGG CTAATTTCCA GGAGTTAGCG
AAAAAGTTCT CTAACTGCCC GTCAAAACGC AACGGTGGCG ATCTGGGTGA GTTCAATAAA
GGGGATATGG TCCCTGCATT CGATAAAGCG GTATTTAGCT GCGAATTGCT GCAACCTTAT
GGCCCGGTCA AAACTCAGTT TGGATATCAC ATCATTAAAG TGTTGTACCG CAGCTAA
 
Protein sequence
MVTVTMANKA SALHILVDDE KQANDILAQL NNGANFQELA KKFSNCPSKR NGGDLGEFNK 
GDMVPAFDKA VFSCELLQPY GPVKTQFGYH IIKVLYRS