Gene YPK_4027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4027 
Symbol 
ID6090127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4441435 
End bp4442172 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID641599124 
ProductTDP-fucosamine acetyltransferase 
Protein accessionYP_001722742 
Protein GI170026237 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID[TIGR02382] TDP-D-fucosamine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTCC ACGCCAGTAT TGAGCCACTG GGCTGGGAAA GTGAATTTTT CCAGCGCCAA 
AGTGCAAAAT TGATTTTTTC CGACTCAGCC CCGCCACTTA ACCCGGCTGA GTTGGCTGCT
TTTACTCTCG TTCAGGCTAA AGTACCTACT CATCGCCTTG ATCTTATAGA TGCCCTGAGC
CAACTTGATT TTCATTTGGT TGAAGGGGAA ATTGATCTGT CGCTGGCCGT GGGTGAAAAA
GAAGGTATTG GCACGGAAAA TGCTACATCA GAACCCAATA TGGGGCCCTA CTCGCAACGG
GTTGCCACCG AGGCAGATAT TCCGCAGTTG CGCCGTGTTG CTGCCAGTAC TTTTGCCTTA
AGCCGCTTTC GTGCGCCTTG GTATGACGCA CAGGACAGTG GGCGATTTTA TGCTTTGTGG
GTTGAAAAGG CGGTGCTGGG AACCTTTGAT CACCAATGTT TATTGGTGCT CGACTCTACG
GATCAACCCG TCGGGTTTGT GACGTTGCGT GACTTGCAAG ACGGGAGTGC GCGTATTGGC
CTGTTGGCCG TATTCCCCGG TGCACAGAGT AAAGGTATAG GGTTAAGATT AATGTCGGCG
GCGAAGCAGT GGTGCCAGCA TCATGGGTTA CACCGGTTAC GGGTAGCCAC ACAAATGAGC
AATATTGCTG CTTTACGTCT CTATATTCGT AGTGGTGCCT CCATTGAGAG TACCGCGTAT
TGGTTATGCA GGGGATGA
 
Protein sequence
MPVHASIEPL GWESEFFQRQ SAKLIFSDSA PPLNPAELAA FTLVQAKVPT HRLDLIDALS 
QLDFHLVEGE IDLSLAVGEK EGIGTENATS EPNMGPYSQR VATEADIPQL RRVAASTFAL
SRFRAPWYDA QDSGRFYALW VEKAVLGTFD HQCLLVLDST DQPVGFVTLR DLQDGSARIG
LLAVFPGAQS KGIGLRLMSA AKQWCQHHGL HRLRVATQMS NIAALRLYIR SGASIESTAY
WLCRG