Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3979 |
Symbol | |
ID | 6087299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4388685 |
End bp | 4390256 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641599073 |
Product | signal recognition particle-docking protein FtsY |
Protein accession | YP_001722695 |
Protein GI | 170026190 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0552] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAAAG AAAAAAAACG TGGATTTTTT TCCTGGCTGG GTCTTGGCCG TCAGAGTGAA GAACCAGCAG CAGAGCCGCT GGCGACTGAA AAAGAAGGCG TTACAGAGCA AGAAGACGTT ATTGAACAAA CCGGCGTTAT TGAGCAAACC GTTGAGCACG TCATTAGTGA AAAAACGACT GAAGCTCCCG CGGAGAATGC CTTTATTGAG GTAGAACTGC GCGAGCAGGT CGCTGCGGTA ATTCCTACTG AGCCGAATAA CGCCATAATG AGTGAGGGCG TCCCTGACAC TTTACCAGAG AGGGCGGTTG CCGAATCAGT AGTTGCCGAA TTAGTAGAGA CCGGTGACAA CGCGGCCATT GTTCATGATG AGATTATCGA GCCAATAACG CAGGTAACGG AAGCTGGCGG TGAGCTCTCT TTAGTAAAAC CTGGCATCGA GGGTGATACC ACTGAACAGG GCGGCCCCAC AGACAATCTG CCAAAACGGT CGTTAACGGA AGACAACCTT ATTATTGATG TTCCCACCCC GCAGGCGGTG GTAGAAGAAT CGCGGGTTGA CGCTGTTGAG CAACCTACCG AAACTTCTGA AGTTGAAGAA GTTGAAGAAA AAATTATCCC GGTAGCGGCT CAAGAACAAG AGCGGCCAAC CAAAGAAGGT TTCTTCGCGC GTTTAAAACG CAGCTTAATC AAGACTAAAC AGAATCTTGG CTCCGGTTTT ATGGGGCTGT TCAGCGGCAA AAAGATTGAT GATGACTTGT TTGAAGAGCT GGAAGAACAG CTCCTGATCG CCGATGTTGG TGTCGAAACA ACCCGTAAAA TCATTACTTC TCTGACAGAA CATACCAGCC GTAAGCAGTT AAAAGATGCT GATGCGCTGT ACGGCAAGCT CAAAGAGGAA ATGTCTGAGA TTCTGTCTAA AGTTGACAAG CCATTAGATG TTAGCGGCAA GAGTCCGTAT GTCATTTTAA TGGTTGGTGT TAATGGCGTG GGCAAAACCA CCACTATTGG CAAACTGGCG CGCCAATTCC AGGCTGAAGG TAAATCTGTC ATGTTGGCGG CGGGTGATAC ATTCCGTGCC GCTGCCGTTG AGCAATTACA AGTTTGGGGT GAGCGTAACA AGATTGCGGT TGTTGCACAG CATACCGGTG CAGATTCCGC TTCGGTTATT TTCGATGCGA TTCAGGCGGC TAAAGCCCGT GGTATTGATG TGCTGTTGGC CGATACCGCT GGGCGTTTAC AAAATAAAGC CCACTTGATG GAAGAGCTGA AGAAGATTGT CCGGGTAATG AAAAAACTGG ACGGCGACGC CCCCCATGAG GTTATGCTGA CACTGGATGC CAGTACCGGA CAAAATGCGG TGAGTCAGGC AAAACTGTTT AATGAAGCAG TGGGCCTGAC CGGGATTACC CTAACTAAAC TGGATGGTAC CGCCAAAGGC GGGGTGATTT TTGCCATTGC TGATCAGTTT GAGATCCCAA TCCGTTATAT CGGTGTCGGA GAAGGTATAG AAGATTTGCG GCCATTTAAG GCTGACGAAT TTATTGAGGC TCTTTTTGCC CGAGAGGATT AA
|
Protein sequence | MAKEKKRGFF SWLGLGRQSE EPAAEPLATE KEGVTEQEDV IEQTGVIEQT VEHVISEKTT EAPAENAFIE VELREQVAAV IPTEPNNAIM SEGVPDTLPE RAVAESVVAE LVETGDNAAI VHDEIIEPIT QVTEAGGELS LVKPGIEGDT TEQGGPTDNL PKRSLTEDNL IIDVPTPQAV VEESRVDAVE QPTETSEVEE VEEKIIPVAA QEQERPTKEG FFARLKRSLI KTKQNLGSGF MGLFSGKKID DDLFEELEEQ LLIADVGVET TRKIITSLTE HTSRKQLKDA DALYGKLKEE MSEILSKVDK PLDVSGKSPY VILMVGVNGV GKTTTIGKLA RQFQAEGKSV MLAAGDTFRA AAVEQLQVWG ERNKIAVVAQ HTGADSASVI FDAIQAAKAR GIDVLLADTA GRLQNKAHLM EELKKIVRVM KKLDGDAPHE VMLTLDASTG QNAVSQAKLF NEAVGLTGIT LTKLDGTAKG GVIFAIADQF EIPIRYIGVG EGIEDLRPFK ADEFIEALFA RED
|
| |