Gene YPK_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3979 
Symbol 
ID6087299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4388685 
End bp4390256 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content49% 
IMG OID641599073 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_001722695 
Protein GI170026190 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG AAAAAAAACG TGGATTTTTT TCCTGGCTGG GTCTTGGCCG TCAGAGTGAA 
GAACCAGCAG CAGAGCCGCT GGCGACTGAA AAAGAAGGCG TTACAGAGCA AGAAGACGTT
ATTGAACAAA CCGGCGTTAT TGAGCAAACC GTTGAGCACG TCATTAGTGA AAAAACGACT
GAAGCTCCCG CGGAGAATGC CTTTATTGAG GTAGAACTGC GCGAGCAGGT CGCTGCGGTA
ATTCCTACTG AGCCGAATAA CGCCATAATG AGTGAGGGCG TCCCTGACAC TTTACCAGAG
AGGGCGGTTG CCGAATCAGT AGTTGCCGAA TTAGTAGAGA CCGGTGACAA CGCGGCCATT
GTTCATGATG AGATTATCGA GCCAATAACG CAGGTAACGG AAGCTGGCGG TGAGCTCTCT
TTAGTAAAAC CTGGCATCGA GGGTGATACC ACTGAACAGG GCGGCCCCAC AGACAATCTG
CCAAAACGGT CGTTAACGGA AGACAACCTT ATTATTGATG TTCCCACCCC GCAGGCGGTG
GTAGAAGAAT CGCGGGTTGA CGCTGTTGAG CAACCTACCG AAACTTCTGA AGTTGAAGAA
GTTGAAGAAA AAATTATCCC GGTAGCGGCT CAAGAACAAG AGCGGCCAAC CAAAGAAGGT
TTCTTCGCGC GTTTAAAACG CAGCTTAATC AAGACTAAAC AGAATCTTGG CTCCGGTTTT
ATGGGGCTGT TCAGCGGCAA AAAGATTGAT GATGACTTGT TTGAAGAGCT GGAAGAACAG
CTCCTGATCG CCGATGTTGG TGTCGAAACA ACCCGTAAAA TCATTACTTC TCTGACAGAA
CATACCAGCC GTAAGCAGTT AAAAGATGCT GATGCGCTGT ACGGCAAGCT CAAAGAGGAA
ATGTCTGAGA TTCTGTCTAA AGTTGACAAG CCATTAGATG TTAGCGGCAA GAGTCCGTAT
GTCATTTTAA TGGTTGGTGT TAATGGCGTG GGCAAAACCA CCACTATTGG CAAACTGGCG
CGCCAATTCC AGGCTGAAGG TAAATCTGTC ATGTTGGCGG CGGGTGATAC ATTCCGTGCC
GCTGCCGTTG AGCAATTACA AGTTTGGGGT GAGCGTAACA AGATTGCGGT TGTTGCACAG
CATACCGGTG CAGATTCCGC TTCGGTTATT TTCGATGCGA TTCAGGCGGC TAAAGCCCGT
GGTATTGATG TGCTGTTGGC CGATACCGCT GGGCGTTTAC AAAATAAAGC CCACTTGATG
GAAGAGCTGA AGAAGATTGT CCGGGTAATG AAAAAACTGG ACGGCGACGC CCCCCATGAG
GTTATGCTGA CACTGGATGC CAGTACCGGA CAAAATGCGG TGAGTCAGGC AAAACTGTTT
AATGAAGCAG TGGGCCTGAC CGGGATTACC CTAACTAAAC TGGATGGTAC CGCCAAAGGC
GGGGTGATTT TTGCCATTGC TGATCAGTTT GAGATCCCAA TCCGTTATAT CGGTGTCGGA
GAAGGTATAG AAGATTTGCG GCCATTTAAG GCTGACGAAT TTATTGAGGC TCTTTTTGCC
CGAGAGGATT AA
 
Protein sequence
MAKEKKRGFF SWLGLGRQSE EPAAEPLATE KEGVTEQEDV IEQTGVIEQT VEHVISEKTT 
EAPAENAFIE VELREQVAAV IPTEPNNAIM SEGVPDTLPE RAVAESVVAE LVETGDNAAI
VHDEIIEPIT QVTEAGGELS LVKPGIEGDT TEQGGPTDNL PKRSLTEDNL IIDVPTPQAV
VEESRVDAVE QPTETSEVEE VEEKIIPVAA QEQERPTKEG FFARLKRSLI KTKQNLGSGF
MGLFSGKKID DDLFEELEEQ LLIADVGVET TRKIITSLTE HTSRKQLKDA DALYGKLKEE
MSEILSKVDK PLDVSGKSPY VILMVGVNGV GKTTTIGKLA RQFQAEGKSV MLAAGDTFRA
AAVEQLQVWG ERNKIAVVAQ HTGADSASVI FDAIQAAKAR GIDVLLADTA GRLQNKAHLM
EELKKIVRVM KKLDGDAPHE VMLTLDASTG QNAVSQAKLF NEAVGLTGIT LTKLDGTAKG
GVIFAIADQF EIPIRYIGVG EGIEDLRPFK ADEFIEALFA RED