| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3972 |
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| Symbol | livM |
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| ID | 6088772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4381374 |
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| End bp | 4382660 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641599066 |
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| Product | leucine/isoleucine/valine transporter permease subunit |
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| Protein accession | YP_001722688 |
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| Protein GI | 170026183 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.640531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGC TCAACTTCGT TAATGCCATT ATTTCCAGCT TTGTGTTACT GGTCCTCGCC
TCGTTTGTGA TGGGGTTGCA GTTGCAGTTA GACGGCACCC GATTGGTGGT ACAAGGTGCT
TCGGAAGTCC GTTGGTTGTG GATTGGTGCC GGTTGTCTGG TGGTTTTTTG CTTCCAACTG
GTACGTCCGC TCATACAACA AGGGATTAAA AAAGTCTCAG GCCCGGCGTG GGTGCTGCCA
AGTTTTGATG GCACCACACC GCGGCAAAAA CTCTTGGCAG CCGTGGTTAT TATCGCCGCA
GTTGCCTGGC CATTTTTAGT CTCTCGCGGC TCTGTCGATA TCGCCACCCT AACGCTGATT
TACGTCATGT TGGGGCTGGG ATTGAATGTC GTCGTCGGGC TATCAGGCCT GCTGGTACTG
GGTTACGGCG GTTTTTATGC CATTGGTGCC TATACTTACG CGCTGCTAAA TCACTATTAC
GGTTTAGGAT TTTGGGAAAG CCTACCGCTG GCCGGGATAA CCGCCGCGCT ATCAGGCTTC
CTGCTAGGCT TCCCGGTACT GCGTTTACGT GGGGATTATC TGGCCATTGT GACACTGGGC
TTTGGTGAGA TTGTGCGTAT TTTACTGCTC AATAACACTG AGATCACCGG GGGGCCGAAT
GGCATCAGCC AAATCCCTAA ACCAACGCTG TTTGGTTTGG AATTTAGCCG CACGGCGAAA
GATGGCGGTT GGGATACCTT CCATAACTTC TTTGGCCTGA CTTACGATCC CAGCCACCGC
ATCATTTTCC TGTATCTGGT GGCGTTATTA TTGGTGATCC TGACGCTGTT CGTCATTAAC
CGGTTACTGC GTATGCCGCT GGGCCGTGCG TGGGAAGCAC TGCGTGAAGA TGAAATCGCC
TGCCGCTCAC TGGGTCTCAG CCCGACCAAA ATTAAGCTGA CGGCATTTAC CATCAGCGCG
GCCTTTGCAG GTTTTGCCGG TACCTTGTTT GCTGCCCGGC AGGGGTTTGT CAGCCCAGAG
TCTTTCACCT TTGTTGAATC GGCTTTCGTT CTGGCGATAG TGGTGCTAGG CGGGATGGGA
TCGCAGTTTG CGGTCATTTT GGCTGCCGTG TTGCTCGTTG TTTCGCGCGA ATTAATGCGA
GATCTCAATG CTTACAGCAT GTTGCTGTTG GGGGCGCTAA TGGTCTTGAT GATGATCTGG
CGGCCACAAG GGTTGTTACC GATGAAACGG CCACAACTGA AGCTGAAAGT TGCTGATGTA
AAGGCTAAGC AGGGAGAGCA GGCATGA
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| Protein sequence | MKQLNFVNAI ISSFVLLVLA SFVMGLQLQL DGTRLVVQGA SEVRWLWIGA GCLVVFCFQL
VRPLIQQGIK KVSGPAWVLP SFDGTTPRQK LLAAVVIIAA VAWPFLVSRG SVDIATLTLI
YVMLGLGLNV VVGLSGLLVL GYGGFYAIGA YTYALLNHYY GLGFWESLPL AGITAALSGF
LLGFPVLRLR GDYLAIVTLG FGEIVRILLL NNTEITGGPN GISQIPKPTL FGLEFSRTAK
DGGWDTFHNF FGLTYDPSHR IIFLYLVALL LVILTLFVIN RLLRMPLGRA WEALREDEIA
CRSLGLSPTK IKLTAFTISA AFAGFAGTLF AARQGFVSPE SFTFVESAFV LAIVVLGGMG
SQFAVILAAV LLVVSRELMR DLNAYSMLLL GALMVLMMIW RPQGLLPMKR PQLKLKVADV
KAKQGEQA
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